Protein

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Genbank accession
QPI13520.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKSIQFKRSKIAGAKPTAAQLDEGELAINLKDRLLFTKDDTGSIIDLGFAKGGNIDGNVIHKGNYTQTGTYTIAGAISQTSGHFTTTGNITATGDITAKARLMTDNGEVLVRGTGTTHVRFQDLADARERGIIYSQNRAGDTKQILNVRVQDYTNSTSNIFAFNGDGLFYAPSISSGTSVKSPVIYTNTVDTGNKSALDYDISSLANNNPASSSATAINYLRISRHAVNGIRYRELNNVNGISWHSISTAGTAKYLWSFNADGDVKTSNSLSVGLPGDSSGYSTLGPSAIALGDNNTGLKWYQDGYFYTVNNGTRTLLYSPESIVSLRKMVMGYSVNGNDLTTPPTENYALATVVTYHDDNAYGDGQTLLGYYQGGNYHHYFRGKGTTNVNTAGGLLVTPGNIDAVGGMVTIDGRSNASTVLFKGNTIGYSSVDNIELKVWGDTFNTVGGSRKNVMETSDATGWMHYIQRTTAGKVESYLNGTMNVVEGLTVNQDTSLKRNLYVSNEIKVRAASGLRIWNDKYGVIFRNSEDQLHIIPTNVNAGESGGLGPLRPLSITLDTGIVKIPNLAANQVSFSSTGVLEFIAGNGASYANQNTTKAPLYQTLGSATQAFYPITKQKNTVSNVTVAQGMDRATSEYRIVAQGDLLGDGDATGLQYWRFTKEGNFITRNRLYAGTAFLNTDGNIAGSIWNKYSGATNLDAAVNTRVGKSGDTMTGKLTIEAPGDALVLKTTTGTSSHIRSDVNGTGNWYVGKGGDDNGIGLYSYATNCGLYITNNGEFNVDLSGAGLAMQMNYYRMYVNGRAWVNTQGHGYGNQWATEAPYFVDFGESVPKDSYMPIIKGKSTLITEGYSTKADFGIIRTGGAATWGSAVIRVGSAESGDASHPNAIFVFGADGTLTAPNALNASGRMGIGTACTLPNASLAIGDNDTGFATRGDGSLGAYANGQSVFFWEFNGITTEQNKFLNVNAGMYVRDNIDVNDVYIRSDIRCKSEIKLIDNAQEKSKLLGGYTYLLKNSVTDEVKPSAGLIAQEVQEVLPELVTEDKETGLLRLNYNGIIGLNTATINEHTDEIKELKSEIAELKALIKSLL
Physico‐chemical
properties
protein length:1093 AA
molecular weight: 117037,75220 Da
isoelectric point:5,95698
aromaticity:0,08783
hydropathy:-0,28939

Domains

Domains [InterPro]
DC_0538
STR
1–752
DC_0538 DC_0613
G3DSA:6.20.80.10
STR
728–784
G3DSA:6.20.80.10 IPR030392
IPR030392
CHP
989–1045
IPR030392 Coil
QPI13520.1
1 1093
Architecture
STR
RBD
STR 1-784 | RBD 802-1093
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI13520.1
1 1093
Domain Start End Length (AA) Confidence
N-terminal 1 879 879 0,0308
Central domain 880 1078 200 0,2970
C-terminal 1079 1093 14 0,9757
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-879
Central
880-1078
C-terminal
1079-1093

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalM_ABTNLsp5
[NCBI] 		2789809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI13520.1 [NCBI]
Genbank nucleotide accession
MW149274 [NCBI]
CDS location
range 154193 -> 157474
strand -
CDS
ATGGCTACTTTAAAATCGATACAATTTAAAAGAAGTAAAATAGCAGGAGCCAAGCCTACTGCAGCCCAGTTAGATGAAGGCGAACTGGCTATTAACTTAAAGGACCGATTACTTTTTACTAAAGACGATACCGGCTCCATCATTGACCTTGGCTTTGCTAAAGGTGGTAATATCGATGGTAACGTTATCCATAAAGGAAATTATACCCAAACCGGTACCTATACCATAGCCGGAGCCATTTCACAAACGTCTGGACATTTTACTACTACTGGTAATATCACAGCAACCGGTGATATTACTGCAAAAGCCCGTTTAATGACAGATAACGGTGAAGTTCTTGTACGAGGTACAGGAACTACCCATGTTCGATTCCAGGATTTGGCTGATGCTCGCGAAAGAGGCATAATTTATTCTCAAAACCGTGCTGGGGATACCAAGCAAATCTTGAACGTTCGTGTTCAGGATTACACTAATTCGACATCTAATATTTTTGCATTCAACGGCGACGGTTTATTTTATGCTCCGTCTATTTCCAGTGGAACATCGGTAAAATCTCCAGTAATTTATACTAATACCGTTGATACTGGTAATAAATCAGCTCTTGATTATGATATATCTTCATTGGCAAATAATAATCCTGCAAGTTCAAGCGCAACGGCTATTAACTATCTTAGAATAAGTAGACACGCTGTCAATGGAATTAGGTATCGTGAACTTAATAATGTAAATGGTATTTCATGGCATTCTATTTCTACAGCCGGAACAGCTAAGTATCTTTGGTCATTTAATGCAGATGGTGATGTCAAAACATCAAATTCTCTTTCCGTTGGCCTACCTGGGGATAGCTCAGGATACTCAACATTAGGTCCGTCTGCTATCGCACTTGGTGACAATAACACAGGTTTGAAATGGTATCAAGATGGATATTTCTATACAGTAAACAATGGTACGAGAACTTTACTTTACAGCCCTGAATCAATCGTAAGCCTTAGAAAAATGGTTATGGGTTATTCTGTAAATGGCAATGATTTGACTACTCCTCCGACAGAAAACTACGCATTAGCCACCGTTGTTACTTATCATGATGATAACGCGTATGGTGATGGCCAAACTCTTTTAGGTTATTACCAAGGTGGTAATTATCACCACTATTTCCGTGGTAAAGGTACTACAAACGTTAACACTGCTGGAGGTCTGTTAGTTACTCCCGGTAATATAGATGCAGTCGGCGGCATGGTTACCATTGATGGACGCAGTAATGCTTCAACTGTTCTTTTTAAAGGAAATACTATAGGATATAGTTCAGTTGATAATATAGAGCTCAAAGTTTGGGGTGACACTTTTAATACAGTAGGTGGTTCTCGTAAAAACGTAATGGAAACATCCGATGCTACCGGCTGGATGCATTATATTCAACGAACTACAGCAGGTAAAGTCGAATCCTATTTAAATGGTACCATGAATGTAGTTGAAGGATTGACTGTCAATCAAGATACATCCTTAAAACGCAATCTGTATGTTTCCAATGAAATTAAAGTTCGCGCTGCTAGTGGTCTTCGTATTTGGAATGATAAGTACGGTGTTATTTTCCGAAATTCAGAAGACCAGCTGCATATTATCCCAACCAATGTTAATGCCGGCGAAAGTGGCGGATTAGGTCCATTACGACCGTTAAGTATTACATTAGACACCGGCATAGTTAAAATTCCTAACTTAGCAGCCAACCAGGTTTCTTTTAGTAGCACAGGTGTATTGGAATTCATCGCCGGTAACGGTGCATCTTATGCTAACCAGAACACAACTAAAGCTCCATTGTATCAAACGCTTGGTTCTGCGACTCAAGCATTCTATCCAATCACCAAACAGAAAAATACAGTTTCGAATGTAACTGTTGCACAAGGTATGGACCGAGCTACGAGCGAATATCGAATTGTTGCTCAGGGTGATTTGCTTGGTGATGGTGATGCTACAGGATTGCAATACTGGCGATTTACCAAAGAAGGTAACTTTATAACTCGGAACCGCTTATATGCTGGTACAGCTTTCTTGAATACTGATGGTAATATTGCAGGTTCTATTTGGAACAAGTATAGCGGCGCTACCAACCTTGATGCTGCAGTGAATACTCGTGTTGGTAAAAGTGGCGACACGATGACTGGTAAGCTGACTATCGAAGCCCCTGGTGATGCTTTAGTATTAAAAACAACCACAGGTACCAGTTCGCATATCCGTTCTGATGTAAACGGTACCGGTAACTGGTACGTCGGCAAAGGCGGCGATGATAACGGAATAGGCCTTTACAGCTATGCTACTAACTGCGGCCTGTATATCACAAATAACGGTGAATTCAACGTAGACCTTTCTGGTGCTGGCTTAGCAATGCAGATGAATTATTATCGCATGTATGTTAACGGTCGAGCATGGGTTAATACACAAGGCCATGGTTACGGAAATCAATGGGCCACAGAAGCTCCTTATTTCGTTGACTTTGGTGAATCTGTTCCTAAAGATAGTTATATGCCAATTATCAAAGGAAAAAGCACTCTAATTACCGAAGGATATTCTACTAAAGCAGACTTTGGTATTATTCGAACTGGTGGAGCTGCTACTTGGGGTTCTGCTGTTATTCGTGTAGGTTCTGCTGAAAGCGGTGATGCAAGCCATCCCAATGCTATATTCGTTTTTGGGGCCGATGGCACCTTAACCGCTCCCAATGCTTTGAATGCCTCAGGTCGAATGGGCATTGGTACAGCATGTACATTACCAAATGCTTCTCTTGCCATAGGTGATAACGATACAGGCTTTGCCACTAGAGGCGACGGAAGCCTAGGAGCCTATGCCAACGGTCAGAGTGTGTTCTTCTGGGAATTTAACGGTATTACGACCGAGCAAAATAAGTTTCTAAACGTTAACGCCGGTATGTATGTTCGTGATAATATTGACGTTAACGACGTTTATATCCGTTCTGATATTCGTTGTAAGTCAGAAATTAAGCTTATCGATAACGCTCAAGAGAAATCCAAACTCTTAGGTGGTTATACTTATTTGCTTAAAAACTCCGTTACTGATGAAGTTAAACCATCTGCAGGTTTAATCGCTCAGGAAGTTCAAGAAGTATTGCCTGAACTTGTGACCGAAGATAAAGAGACTGGCTTACTTCGTTTAAACTATAACGGTATTATCGGTTTAAATACTGCTACTATCAATGAGCATACTGACGAAATCAAGGAATTGAAATCTGAAATTGCTGAATTGAAAGCATTAATTAAATCATTATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
34de47fb1bc03ee3c7ab2e88ae42bbf5f8d52bf7570eda408f03f6d1000141ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5529
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50