Protein

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Genbank accession
WPJ68614.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSGTLTKFPTGSTQYKINFDYLSRKFVKVTLSNSLDATLNKELVVGNDYRFLSATTLEILASQSGFDVIQIYRQTSSELMVDFRDGSVLTSSDLTTAELQAIHIAEEGRDQTVEQAVQFAEAAEKSAEDAAASLSGIKDIIANNNIDSTIRSDLSKSDGYTMIGGLSERFSLPYKWVVVDNAPYNGDLEKAVSESSDGTGFLLGIGKSYDFLTFRNARNTKKNLTFVGGGVPELSADTRSLVAGTGTIIRGPMKTEAGGFQLVNLGVDCGGVVSDELLGGQWDDPIQCSGIGKEANVFIDNVKTLSHTNLTGPNYPGTHSLLLEILDGAYVGKVELIGGYHGLTLKGTNLDVMDAHCYGQRGDAFIIKSDSAATAADIYVGRLKVGLRDNSKFTDVTMGGIYDAHDGVNIDNVEIGSLQVYNASWGLIPSNENTGYISNLRIGNYVAMNVYGNYYSLVIDGRCVGVNIGEHQCSNTSGGISIDPSSVNVSLGNGFSKCATKSGYKLGGNSLVHGNLIADENGEYGVDYVGGLGFDASKVLGYSNPFGLVSTEVSALGSTTGPKNGWGDTGDFSWVMHGKMSIVNGALIKGAGAVPYTSLPITAPRRRTRIAAWGVQGSSMIPVECYVEANGDLNVVGWESITDGNVINFSGQYLAK
Physico‐chemical
properties
protein length:656 AA
molecular weight: 69639,00400 Da
isoelectric point:4,86050
aromaticity:0,08384
hydropathy:-0,10381

Domains

Domains [InterPro]
DC_1263
ATT
1–197
DC_1263
IPR005604
ATT
12–114
IPR005604 DC_0478
WPJ68614.1
1 656
Architecture
ATT
STR
ATT 1-197 | STR 198-656
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ68614.1
1 656
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,9950
Central domain 186 545 361 0,9910
C-terminal 546 656 110 0,9878
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-545
C-terminal
546-656

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STP-SP6
[NCBI] 		3079562 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ68614.1 [NCBI]
Genbank nucleotide accession
OR498733.1 [NCBI]
CDS location
range 24419 -> 26389
strand -
CDS
ATGTCCGGAACTCTTACTAAATTCCCAACTGGAAGCACACAATATAAGATTAACTTCGACTACTTATCCCGTAAGTTTGTTAAAGTTACTTTAAGCAACTCTCTTGATGCTACCTTAAATAAAGAGCTAGTGGTTGGTAACGATTACCGCTTCCTTAGTGCAACCACATTAGAAATACTAGCCAGTCAATCTGGGTTCGACGTCATACAGATTTATCGCCAAACGTCTTCAGAGCTTATGGTTGATTTCAGAGATGGCTCAGTATTGACCTCATCCGACCTCACAACGGCTGAGCTTCAGGCCATCCATATCGCCGAGGAGGGCAGAGACCAGACGGTTGAACAGGCCGTGCAGTTTGCGGAAGCTGCTGAGAAATCTGCCGAGGACGCTGCCGCATCACTTAGCGGGATTAAGGACATAATCGCTAACAACAATATCGATTCAACAATCCGTTCAGACCTGTCCAAGTCGGATGGATACACAATGATTGGCGGACTGTCTGAACGATTCAGTCTACCCTACAAGTGGGTGGTAGTGGATAACGCTCCTTATAATGGCGACCTTGAGAAGGCCGTATCCGAAAGTTCAGACGGTACGGGATTCCTATTAGGTATAGGGAAATCCTACGACTTCCTTACATTCCGCAACGCTCGTAACACTAAGAAGAACCTAACGTTCGTTGGTGGAGGGGTCCCGGAGCTGTCTGCCGATACACGGAGCCTTGTTGCTGGTACTGGAACGATAATCAGAGGACCAATGAAGACTGAGGCTGGTGGGTTCCAGTTAGTGAATCTAGGCGTTGACTGTGGTGGCGTGGTGTCAGACGAACTTCTAGGCGGTCAATGGGACGACCCTATCCAGTGCTCTGGTATTGGTAAAGAGGCAAATGTTTTTATAGATAACGTTAAAACCCTGAGCCATACAAACCTCACTGGTCCAAACTACCCAGGAACTCACAGCTTGCTTCTTGAGATTCTTGACGGAGCTTATGTTGGAAAGGTAGAACTGATTGGCGGCTACCACGGTCTGACCCTTAAGGGGACTAACTTAGATGTGATGGACGCCCACTGTTACGGACAAAGAGGCGATGCGTTTATTATTAAGTCTGACTCTGCTGCAACGGCTGCTGATATCTACGTCGGAAGACTTAAGGTAGGGCTTCGTGATAACTCTAAGTTTACAGATGTTACTATGGGCGGCATCTACGACGCTCACGATGGGGTTAACATAGATAACGTGGAGATAGGCTCTCTTCAGGTCTACAACGCATCATGGGGGCTCATTCCCTCAAATGAAAATACTGGTTATATCAGCAACTTGCGTATTGGGAACTACGTGGCTATGAACGTATATGGTAACTACTATTCGCTAGTGATTGATGGTCGCTGCGTTGGTGTTAACATAGGGGAGCACCAGTGTTCTAATACATCTGGCGGAATCAGCATAGACCCTTCCTCTGTTAACGTGTCATTGGGTAACGGATTCTCAAAGTGTGCCACAAAGTCTGGTTACAAGCTGGGTGGTAACTCTCTGGTTCACGGGAACCTGATAGCCGATGAGAATGGTGAGTACGGTGTTGATTATGTTGGTGGCCTAGGGTTCGATGCATCAAAAGTTCTAGGGTATAGTAACCCATTCGGTCTGGTGTCGACTGAGGTTAGCGCCCTTGGGTCAACTACTGGACCTAAGAATGGATGGGGAGACACCGGGGACTTTTCATGGGTAATGCATGGCAAGATGTCGATAGTAAACGGAGCCCTTATTAAGGGAGCTGGGGCTGTTCCATACACATCCCTACCAATAACGGCGCCTCGCAGGAGAACGCGCATCGCTGCATGGGGTGTGCAAGGGTCGAGCATGATTCCAGTCGAGTGCTATGTGGAAGCGAATGGGGACCTTAACGTCGTTGGCTGGGAGTCCATTACAGACGGAAACGTGATAAACTTCTCCGGTCAGTACCTAGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7ab20ccc72aae9e612093030986b509d46874e5fbd891e84150e7a2fe34f6ac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8056
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50