Protein

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Genbank accession
WNM53904.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MILRLFLDFPVELGQEFRYKTVENFKRIVNAHGRLVDDLEYHRKEEKHAHDAKQIDYTTSYSRSVSDALDKQNNRINNLVVGANGDAMAEVKDSRVALDGTISELLSQRLDYDFGKLNKKIDDNFKYLNDKIERIVNVNDYGADPTGQKDSTLAFQKAFGEGHRHVHMTEGTYIISGVKMPNYTILSGEGKGITYLRIADDAPAETIGITNLNMDGTAEYIGVDNFTIDGNRTRQGNTLSPAGGSRSSNIRFAGVKHGFAYSVESFSSLLHGIDVTYASDDYFYQGDGIRVKEALESKYIHIQECETYDFGDDGITTHHSRYLILQNNYSHDPVKDSGNHNGIEVDDGSQHVFVMGNKTEKCFGGLEIKAHEPTSAASDVVVSDHLDIKSIRSYNIRHIGHHRAGDVQSKTAYNIMLNNCTSLYPQYNGSYENTTPRAMVICAYRNVVVNNFTAIGDGNFMANMPVIAVQFRAENVMLNNINVSGFKNSLADVKVFGGANRPKKVSLSNINIVNSSNNRGIAGGGKIYDLRIINANLQGNGTGNGVELYNNTAEIVGVSAENYKRPAMIAGKEYFYMPTSLKGGFSGGAQVVQLLLKEVLLLPLLVVPLLIVTVLLL
Physico‐chemical
properties
protein length:617 AA
molecular weight: 68132,75520 Da
isoelectric point:6,13824
aromaticity:0,08590
hydropathy:-0,32950

Domains

Domains [InterPro]
DC_0125
ATT
1–215
DC_0125 DC_0616
IPR012334
STR
118–579
IPR012334
IPR011050
STR
133–486
IPR011050
IPR024535
ENZ
135–366
IPR024535
WNM53904.1
1 617
Architecture
ATT
STR
ATT 1-215 | STR 216-602 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNM53904.1
1 617
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,9905
Central domain 151 593 444 0,9816
C-terminal 594 617 23 0,0288
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-593
C-terminal
594-617

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage S-CoN_Ph15
[NCBI] 		3076571 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNM53904.1 [NCBI]
Genbank nucleotide accession
OR354838 [NCBI]
CDS location
range 31429 -> 33282
strand +
CDS
ATGATTTTGAGATTGTTTTTAGATTTCCCTGTTGAATTAGGGCAAGAGTTTAGATATAAAACAGTAGAAAATTTCAAAAGAATCGTTAATGCTCATGGGCGTTTAGTTGATGATTTAGAATACCATAGAAAAGAAGAAAAGCACGCACATGATGCTAAACAAATTGATTACACAACAAGTTATTCAAGAAGTGTTAGTGACGCATTAGATAAACAGAACAATAGAATCAATAATCTAGTAGTCGGTGCAAATGGAGATGCTATGGCAGAGGTTAAAGATAGCCGAGTTGCATTAGACGGAACAATAAGTGAATTACTTTCACAAAGACTAGATTATGATTTTGGTAAATTGAATAAAAAAATTGATGATAATTTTAAGTATCTTAACGACAAAATTGAACGTATTGTTAATGTTAACGATTATGGTGCTGACCCTACAGGTCAAAAAGATTCAACATTAGCATTCCAAAAAGCATTTGGAGAAGGTCATAGACATGTTCATATGACAGAAGGTACTTATATTATATCTGGTGTTAAAATGCCTAACTATACGATTTTAAGTGGGGAAGGTAAAGGAATAACATATTTAAGGATTGCAGATGATGCGCCAGCTGAAACAATTGGTATAACTAACTTAAATATGGATGGAACAGCTGAATATATTGGTGTTGATAATTTCACAATTGACGGAAATAGAACAAGACAAGGGAATACGTTATCTCCAGCTGGTGGTTCACGTTCAAGCAACATTAGATTTGCTGGTGTTAAGCATGGTTTTGCATATTCTGTAGAATCATTTAGCAGTTTATTACATGGTATTGATGTAACGTACGCTAGTGATGATTATTTCTATCAAGGAGACGGAATCAGAGTAAAAGAAGCATTAGAAAGTAAATATATTCATATACAAGAATGTGAAACTTATGATTTCGGAGACGATGGTATTACTACTCATCATAGTAGATACTTAATTCTGCAAAATAACTATTCACACGACCCAGTAAAAGATAGTGGGAACCATAACGGGATTGAAGTGGACGATGGTTCACAACATGTGTTTGTAATGGGGAATAAAACAGAAAAATGTTTTGGTGGTTTAGAGATTAAAGCGCATGAACCTACAAGCGCAGCAAGTGATGTTGTTGTAAGTGACCATCTTGATATTAAAAGTATTCGTTCTTATAATATTCGTCATATAGGACATCATAGAGCCGGAGATGTACAATCTAAAACAGCCTATAATATTATGTTGAATAACTGTACTTCATTATATCCTCAATATAATGGTTCATATGAGAATACAACACCAAGAGCAATGGTTATTTGTGCTTACAGAAATGTGGTTGTTAATAACTTTACAGCTATTGGCGATGGCAATTTTATGGCAAATATGCCAGTTATCGCTGTCCAATTCAGAGCAGAAAACGTTATGCTTAACAATATTAATGTAAGTGGTTTTAAAAATTCATTAGCTGACGTTAAAGTATTTGGTGGAGCAAATAGACCTAAAAAAGTATCATTATCTAATATCAATATTGTTAATTCATCTAACAATAGAGGTATTGCAGGCGGTGGAAAAATTTATGATTTAAGAATTATAAATGCTAACTTGCAAGGTAATGGCACAGGAAATGGCGTTGAATTATATAATAACACAGCTGAAATTGTTGGAGTAAGTGCAGAGAATTATAAAAGACCAGCAATGATTGCGGGTAAAGAATATTTCTATATGCCCACAAGTCTTAAAGGAGGATTCAGTGGGGGAGCACAGGTGGTGCAGCTATTGCTGAAAGAAGTGCTGTTATTGCCTCTACTGGTGGTTCCTTTGCTCATAGTAACCGTTCTTTTGTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
90c3fec6ac3a5648759470980882496096aee1ed6341584bafc1060bdc925081
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50