Protein

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Genbank accession
QPZ53469.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MALIKLNNRAVKDASAFGSVTSLGSLSLIQKQTASSSATVDFTSGIDSTYKEYIFYFVNMHPSSNASFTFQGNAVGGSGFNETMTTTFFYAYHKEDGSDTSLMYNTGHDQAQGTGYQTISADATGTDNDNCLSGYLHIFNPSSTTFVKHYISRMSNTNGGGSTTYMCDCYGAGYFNTTSAIDEISFKFGSGNIDAGDILLYGVN
Physico‐chemical
properties
protein length:204 AA
molecular weight: 21859,63880 Da
isoelectric point:4,79013
aromaticity:0,13235
hydropathy:-0,24069

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC034P
[NCBI] 		2796520 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53469.1 [NCBI]
Genbank nucleotide accession
MW273922.1 [NCBI]
CDS location
range 12447 -> 13061
strand -
CDS
ATGGCATTAATAAAACTAAACAACAGAGCAGTAAAAGACGCATCAGCATTTGGAAGTGTAACCTCATTAGGAAGTTTATCTTTAATACAAAAACAAACTGCTAGTTCTTCTGCAACAGTAGATTTTACTTCAGGAATTGATAGCACTTATAAAGAATATATTTTTTATTTTGTGAATATGCACCCATCATCTAATGCTTCTTTTACATTTCAAGGTAACGCAGTAGGTGGTAGTGGTTTTAATGAAACAATGACTACAACATTTTTTTATGCTTATCATAAAGAAGATGGTTCTGATACTTCTTTAATGTATAATACAGGTCATGATCAAGCACAAGGAACAGGGTATCAAACAATAAGTGCTGATGCTACAGGAACAGATAATGATAATTGTTTAAGTGGTTATTTACATATTTTCAATCCTAGTTCAACGACATTTGTAAAACATTATATTTCAAGAATGAGCAATACAAATGGTGGTGGCTCTACAACTTATATGTGTGATTGTTATGGTGCTGGATATTTCAATACTACATCAGCTATTGATGAAATTAGTTTCAAATTTGGTTCAGGAAACATAGATGCTGGAGACATCTTGCTATATGGAGTTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
18b31e22deda20fadf9658b8595bc82c3af575513ad4b1db77578702ac81d6fb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9048
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank