Protein

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Genbank accession
QIG76643.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,70
Protein sequence
MPFAAANKISTSHIPGCISISEAQYAQALAGMTSKADPKKVSVANGFQMVAPSYVEPIALMETITLPSLGTRNPVNTGLARHPSGDGWLVGDDGRTVTGTTTDGGVIWYNEDFTQIIANFKAIATMGLTNQHSIQGVCAIPGTNEFWCIGRRLPTTENSRVLKCDATTGAVLLNVPCQNTGNGVAVVPEHGVYYTVQTTGELTKWDLNGVYLPPIVDLDTQTTNDMLHYLGNGKMLLTYGANLSNGYIAVVDISGSSPVVTKTVQMPGANAIEGVCIHDGFIWLNNDGEYHSASPALNRVLKYSLGTLLD
Physico‐chemical
properties
protein length:310 AA
molecular weight: 32949,99160 Da
isoelectric point:5,29367
aromaticity:0,07097
hydropathy:0,00548

Domains

Domains [InterPro]
SSF101898
RBD
75–279
SSF101898
QIG76643.1
1 310
Architecture
RBD
RBD 75-279 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG76643.1
1 310
Domain Start End Length (AA) Confidence
N-terminal 1 19 19 0,0992
Central domain 20 250 232 0,4225
C-terminal 251 310 59 0,5949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-19
Central
20-250
C-terminal
251-310

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I1_23
[NCBI] 		2509727 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG76643.1 [NCBI]
Genbank nucleotide accession
MN988556 [NCBI]
CDS location
range 16495 -> 17427
strand +
CDS
ATGCCCTTTGCCGCGGCAAACAAAATCAGCACAAGTCATATTCCCGGCTGTATTTCTATCTCTGAGGCGCAGTATGCCCAGGCTCTCGCCGGCATGACGAGCAAGGCAGACCCGAAAAAAGTCTCCGTCGCTAATGGCTTCCAGATGGTTGCGCCGTCCTACGTCGAGCCGATCGCGCTGATGGAGACGATCACGCTCCCGAGCCTCGGAACACGCAACCCCGTCAACACCGGCCTCGCACGCCATCCTTCTGGCGATGGCTGGCTGGTCGGCGACGACGGCCGCACCGTGACCGGAACCACCACTGACGGCGGCGTCATCTGGTACAATGAGGACTTCACGCAGATCATCGCCAATTTCAAGGCGATCGCCACGATGGGGCTGACGAACCAGCATTCCATCCAAGGCGTCTGCGCCATCCCTGGCACCAACGAGTTCTGGTGCATCGGCCGCCGCCTCCCAACGACAGAAAACAGCCGCGTGCTGAAGTGCGATGCCACGACAGGCGCCGTCCTGCTCAACGTTCCCTGCCAGAACACCGGCAACGGGGTTGCTGTCGTCCCGGAGCATGGCGTCTATTACACGGTCCAGACGACGGGCGAACTCACCAAGTGGGATCTGAACGGTGTCTACCTGCCGCCGATCGTCGATCTGGACACCCAGACCACCAACGACATGCTCCACTACCTGGGCAACGGCAAGATGCTCCTGACTTACGGGGCGAATCTGTCAAACGGGTATATCGCAGTTGTCGATATCTCGGGCTCATCGCCAGTCGTGACGAAAACAGTGCAGATGCCGGGAGCGAATGCCATAGAAGGTGTCTGCATCCATGACGGCTTTATCTGGCTTAACAACGATGGCGAATATCACTCAGCATCACCAGCACTCAACCGCGTGCTGAAATATTCGCTGGGAACGCTGCTGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
72c57681cfda9b6f6ea594b79763ed5dbf334dd15af3ee1eebe66837d80beba4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8145
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank