Protein

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Genbank accession
AVP40472.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MNILRSFTETVVTTPTELFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKIEPAIPDGTVRIERETDIDKMKYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAANAAEVAASQTQYYLKYFNPEIVYPKNARIMLDNGDIVRSTVVNNTSNPNVDMTGWVKVNSVSQIFDETYNITQSVINGNLITVDNFGAKGDGVTDDSAAFQAYCDSALTGQNLYLGAKGRYIIKNQVDLKGKGLVGNGCGKVSEFYYNLGCIDVDGSSPNLQGKTVFINCGPTIQNLTARCSNGAGKQVSFIEIDGYLANIDHITLINFYNQIVVKQALVGFNFTNAWLYYSQNAGIYCEDPLNRVSTTGTFHNIYFQLGDGYAMIFDRDIHGCDFDNIIFESMNGGIKARTVAHCGFGKFWCENLKTATSKAWLEVTGANSCYGNSFTGYVKLLGGWTSKTSPTLDSLSTNNYGGVLVSAEGISIVNAGDKAKMLMLPSGFKTGNATIDETHISSSTVTPLVKRRVIGADGSGAQYLASDTYTKLSRKWGTYNHGSNNAGAFYAPMMLTYDQSFSTPQNNNGWKIVKESTGVYRVERVSGNTSVITNGHIVVGSPLMGSRLGTGTGATHGIQMIETYAGSWTSYTEAAGFKVFWRDSSNALVDPHRFTVAFTATS
Physico‐chemical
properties
protein length:699 AA
molecular weight: 76236,48940 Da
isoelectric point:5,27309
aromaticity:0,10587
hydropathy:-0,16910

Domains

Domains [InterPro]
Coil
122–149
Coil IPR012334
IPR011050
221–556
IPR011050
IPR024535
225–408
IPR024535
AVP40472.1
1 699
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_D2
[NCBI] 		2126803 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVP40472.1 [NCBI]
Genbank nucleotide accession
MH042230.1 [NCBI]
CDS location
range 3183 -> 5282
strand +
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGAACTTTTCCCTATCAGTTTTGAATATGATGAGAAATATGATGCTGTACATGTCTTTCTTAATGACGTAGCAGTTGAAGACTTGGGGTACACTGTATCTCAAGTTAATGCTGTTACTCTAAAAATTGAACCTGCTATTCCAGATGGTACGGTTCGTATTGAACGCGAAACAGACATTGATAAGATGAAGTACATCTTTGATGCTGGTGCGTTGTTCATTGATCAGAATGTTGATGCAGATTTTAGACAGATCGTACACTCGCAGCAAGAGGTACGTGACGGTTTTATTAAACTACGTGGTGATGTACTACCATTAGTACATGGTTTACAAGAAGCTTTGCAACAAGCACAAGAAGCTAGTGAAGCTGCTCAAGAGGCTGCTAATGCAGCAGAAGTAGCTGCTTCACAAACACAGTACTACTTAAAGTACTTCAACCCTGAAATAGTGTACCCTAAAAATGCGCGCATTATGCTTGATAATGGCGATATTGTTCGCTCTACCGTTGTGAATAATACATCCAATCCGAATGTTGATATGACTGGATGGGTAAAGGTTAATTCTGTTAGTCAGATTTTTGATGAAACTTACAATATCACCCAATCAGTAATTAATGGAAATCTAATTACTGTTGATAATTTTGGCGCAAAGGGTGATGGGGTTACAGATGATAGCGCAGCTTTTCAAGCATATTGTGATAGTGCTTTAACTGGACAAAATCTATATCTTGGGGCAAAAGGTCGCTACATCATCAAGAATCAAGTAGACCTAAAAGGTAAAGGTTTGGTTGGCAACGGGTGCGGAAAGGTTAGTGAGTTCTACTACAACTTAGGTTGTATTGATGTTGATGGCTCAAGCCCTAATCTTCAAGGTAAAACAGTATTCATTAATTGTGGTCCTACAATCCAAAATCTTACTGCAAGATGCTCTAATGGAGCAGGAAAACAGGTCTCATTTATTGAAATAGACGGCTATCTAGCCAATATTGACCACATAACGCTTATTAATTTCTACAATCAGATTGTTGTTAAACAAGCACTTGTTGGTTTTAACTTCACAAACGCTTGGTTATATTACTCACAAAATGCTGGAATTTATTGTGAAGACCCATTGAACCGAGTCAGCACAACTGGAACATTTCACAACATTTATTTCCAGTTAGGTGACGGTTATGCAATGATTTTCGACAGGGATATCCACGGGTGTGATTTCGATAATATTATATTCGAATCTATGAATGGAGGTATCAAGGCTCGAACAGTAGCACATTGCGGGTTTGGTAAATTCTGGTGTGAGAACTTAAAGACAGCTACATCTAAAGCTTGGCTAGAAGTCACTGGTGCTAATAGCTGTTATGGGAATAGCTTTACTGGCTACGTTAAATTATTAGGCGGGTGGACGTCGAAAACATCACCAACGCTAGACTCTTTGTCAACAAATAACTATGGTGGTGTATTGGTTAGTGCAGAGGGTATCTCTATTGTTAATGCTGGCGATAAAGCAAAAATGCTTATGCTGCCAAGTGGTTTTAAGACTGGCAACGCAACGATTGATGAAACGCACATTAGCTCATCTACCGTAACACCCTTAGTTAAGAGACGTGTTATTGGCGCAGATGGCTCTGGAGCACAATACCTTGCATCAGACACCTATACAAAGCTTTCTCGCAAGTGGGGAACATATAACCACGGATCAAATAATGCTGGGGCGTTTTATGCACCAATGATGCTTACTTATGATCAGTCATTTAGCACACCACAAAACAATAATGGTTGGAAAATCGTTAAAGAATCTACTGGCGTTTATCGGGTTGAACGTGTTTCTGGGAATACTTCGGTAATCACAAATGGGCATATTGTTGTTGGCTCACCACTAATGGGTTCTCGTCTGGGTACTGGAACAGGTGCTACGCATGGAATTCAAATGATTGAGACCTATGCAGGTTCGTGGACTTCTTACACAGAAGCTGCTGGTTTTAAAGTGTTTTGGCGCGATTCTAGCAATGCCCTAGTCGATCCTCATAGATTTACAGTCGCATTTACAGCAACGAGTTAA

Tertiary structure

PDB ID
29631746ceea1674d39eac78587d381b0ae2eb58ae19b3d6e6a74873f9b7c30e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6966
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Acinetobacter baumannii bacteriophage vB_AbaP_D2 Yuan,Y. 2019-03-21 — GenBank