Protein

View in Explore
Genbank accession
URG17514.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIIKDTLVDLAGGPDWSDDAYAEVWSPDELRDVAGDTATNKRLKVPITETGIETEQLKAGSAMVRLYLGPLRPSLGPFPIVVPDDTAEHRLVELVNEFQPTDPLPSTLPIDRVTGLSTVLDGRLSEEGLSATYAPTSIIPRTAGKKAVGQGELFFNVQDYGATGDGTTDDTAAFQAAINAASAAVSSGEFAGAGRGAVYIPRGSYCIGNLQLKANVTIRGSHFRAVTIIPTATSGFTFGTSGLTTTNRMTSVCLEGFTIGPTSTVAGLSGTRPAAGGIDLSFTLWCSIKSVYIHNIAGIGIKLTETYDLNTFDVHLLYVGVDSNSPAVLMAGDAADTCNANHHFGMRIERCPVMLRVTGVDRAPVNNQFVGCKFEWNVAGQPTTTSAGIWIEHGLQNTFTSCMFVSDSVTYPLIRIGADTGSMSAQGTRFIGCDWNANAATDGWAMETTAKALDVSFVGCHLRNFAKGFVFNDSTRASFTNLTTFNALAPVIVSNGAKLSACEFLETRSTTSGSHYIVQLNANAMVAACFFQGVTSGNKPNGISQGSNCTVTGTRLNQIVVGTSFFGTGSKWRANRMDSVTTSFAGSANYALNNSIEGQAPVSLTHSRALEDTVTTALRTALVSAGLAYDNTVA
Physico‐chemical
properties
protein length:635 AA
molecular weight: 66927,45390 Da
isoelectric point:5,36045
aromaticity:0,08031
hydropathy:0,03669

Domains

Domains [InterPro]
DC_1709
STR
112–635
DC_1709
IPR011050
STR
154–562
IPR011050
IPR024535
ENZ
155–251
IPR024535
IPR012334
STR
155–412
IPR012334
URG17514.1
1 635
Architecture
STR
STR 112-635
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG17514.1
1 635
Domain Start End Length (AA) Confidence
N-terminal 1 169 169 0,9780
Central domain 170 596 428 0,9928
C-terminal 597 635 38 0,9691
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-169
Central
170-596
C-terminal
597-635

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage Mbo4
[NCBI] 		2936912 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodococcus opacus
[NCBI] 		37919 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG17514.1 [NCBI]
Genbank nucleotide accession
ON191532.1 [NCBI]
CDS location
range 22867 -> 24774
strand +
CDS
GTGGCCATCATCAAGGACACCCTCGTCGACTTGGCGGGCGGCCCCGACTGGTCGGATGACGCATACGCCGAAGTCTGGTCACCGGACGAACTCCGCGACGTCGCCGGCGACACGGCGACGAACAAGCGACTGAAGGTACCAATCACGGAGACCGGTATCGAGACGGAGCAGCTGAAGGCAGGGTCGGCGATGGTCCGGCTGTACCTCGGCCCGTTGCGGCCATCCCTGGGCCCGTTCCCGATCGTGGTTCCCGACGACACCGCGGAGCACCGCCTCGTCGAACTCGTGAACGAATTCCAGCCGACGGATCCGCTGCCGTCTACGCTGCCCATCGACCGGGTGACAGGGCTCAGTACGGTCCTCGACGGGCGCCTGTCGGAAGAGGGGCTATCTGCCACTTATGCCCCGACTTCCATCATCCCTCGCACCGCCGGCAAGAAGGCTGTCGGACAGGGCGAATTGTTCTTCAACGTCCAGGACTACGGCGCAACTGGCGACGGAACCACCGACGACACAGCCGCATTCCAGGCAGCGATCAACGCGGCGTCCGCAGCCGTGTCCTCTGGAGAGTTTGCCGGGGCAGGCCGCGGCGCGGTCTACATTCCTCGGGGAAGCTACTGCATCGGAAACCTGCAACTGAAGGCGAACGTCACGATCCGCGGTAGTCACTTCCGTGCCGTCACGATCATCCCTACCGCAACTAGCGGGTTCACGTTCGGCACCTCCGGTCTGACGACCACGAACCGGATGACCTCGGTATGCCTCGAAGGGTTCACCATCGGCCCAACCTCGACGGTCGCGGGCCTTTCAGGAACTCGTCCGGCGGCAGGCGGGATCGACCTCAGCTTCACGCTGTGGTGCTCGATCAAGAGTGTCTACATCCACAACATCGCAGGCATCGGCATTAAGTTGACCGAGACCTACGACCTCAACACGTTCGACGTTCACCTGCTGTACGTGGGCGTCGACAGCAACTCTCCCGCCGTTCTGATGGCAGGAGACGCGGCTGATACGTGTAACGCAAACCACCACTTCGGGATGCGTATCGAACGGTGCCCCGTCATGCTTCGAGTGACAGGCGTGGATCGTGCCCCGGTCAACAACCAGTTCGTCGGGTGCAAGTTCGAGTGGAACGTTGCGGGTCAGCCGACCACGACAAGCGCAGGCATCTGGATCGAACACGGATTGCAGAACACGTTCACGTCCTGCATGTTCGTCTCGGACAGTGTCACCTATCCGCTGATCAGGATCGGCGCTGACACGGGATCGATGAGCGCCCAGGGCACCCGGTTCATTGGATGCGACTGGAATGCCAACGCAGCGACGGACGGCTGGGCGATGGAGACCACAGCCAAGGCCCTGGATGTGTCATTCGTTGGATGCCACCTCAGGAACTTCGCGAAGGGCTTCGTGTTCAACGACTCCACCCGCGCATCGTTCACCAACCTGACCACGTTCAATGCCCTCGCGCCCGTCATTGTCTCCAACGGAGCGAAGCTGTCGGCCTGTGAGTTCCTGGAAACCAGGTCAACGACGTCGGGCTCCCACTACATCGTGCAGTTGAACGCCAATGCGATGGTTGCCGCCTGCTTCTTCCAGGGGGTGACCTCGGGAAACAAGCCGAACGGGATCTCGCAGGGAAGCAACTGCACCGTCACGGGGACGCGACTGAATCAGATCGTTGTCGGCACGTCGTTCTTCGGCACCGGCAGTAAGTGGCGGGCGAACAGGATGGACTCGGTCACCACCTCATTTGCAGGTTCGGCCAACTACGCGCTGAACAACTCCATCGAGGGTCAGGCCCCCGTATCGCTCACGCACTCCCGAGCATTGGAGGACACCGTCACCACTGCACTGCGGACAGCTCTGGTGAGCGCAGGGTTGGCGTATGACAACACTGTTGCCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1d4a0faae965cef6a4ef3f11577f416ae92b7ae861b196acf3ba9aee7be73526
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8031
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50