Protein

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Genbank accession
URG17514.1 [GenBank]
Protein name
pectin lyase domain tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIIKDTLVDLAGGPDWSDDAYAEVWSPDELRDVAGDTATNKRLKVPITETGIETEQLKAGSAMVRLYLGPLRPSLGPFPIVVPDDTAEHRLVELVNEFQPTDPLPSTLPIDRVTGLSTVLDGRLSEEGLSATYAPTSIIPRTAGKKAVGQGELFFNVQDYGATGDGTTDDTAAFQAAINAASAAVSSGEFAGAGRGAVYIPRGSYCIGNLQLKANVTIRGSHFRAVTIIPTATSGFTFGTSGLTTTNRMTSVCLEGFTIGPTSTVAGLSGTRPAAGGIDLSFTLWCSIKSVYIHNIAGIGIKLTETYDLNTFDVHLLYVGVDSNSPAVLMAGDAADTCNANHHFGMRIERCPVMLRVTGVDRAPVNNQFVGCKFEWNVAGQPTTTSAGIWIEHGLQNTFTSCMFVSDSVTYPLIRIGADTGSMSAQGTRFIGCDWNANAATDGWAMETTAKALDVSFVGCHLRNFAKGFVFNDSTRASFTNLTTFNALAPVIVSNGAKLSACEFLETRSTTSGSHYIVQLNANAMVAACFFQGVTSGNKPNGISQGSNCTVTGTRLNQIVVGTSFFGTGSKWRANRMDSVTTSFAGSANYALNNSIEGQAPVSLTHSRALEDTVTTALRTALVSAGLAYDNTVA
Physico‐chemical
properties
protein length:635 AA
molecular weight: 66927,45390 Da
isoelectric point:5,36045
aromaticity:0,08031
hydropathy:0,03669

Domains

Domains [InterPro]
IPR011050
154–562
IPR011050
IPR024535
155–251
IPR024535
IPR012334
155–412
IPR012334
URG17514.1
1 635
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage Mbo4
[NCBI] 		2936912 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG17514.1 [NCBI]
Genbank nucleotide accession
ON191532 [NCBI]
CDS location
range 22867 -> 24774
strand +
CDS
GTGGCCATCATCAAGGACACCCTCGTCGACTTGGCGGGCGGCCCCGACTGGTCGGATGACGCATACGCCGAAGTCTGGTCACCGGACGAACTCCGCGACGTCGCCGGCGACACGGCGACGAACAAGCGACTGAAGGTACCAATCACGGAGACCGGTATCGAGACGGAGCAGCTGAAGGCAGGGTCGGCGATGGTCCGGCTGTACCTCGGCCCGTTGCGGCCATCCCTGGGCCCGTTCCCGATCGTGGTTCCCGACGACACCGCGGAGCACCGCCTCGTCGAACTCGTGAACGAATTCCAGCCGACGGATCCGCTGCCGTCTACGCTGCCCATCGACCGGGTGACAGGGCTCAGTACGGTCCTCGACGGGCGCCTGTCGGAAGAGGGGCTATCTGCCACTTATGCCCCGACTTCCATCATCCCTCGCACCGCCGGCAAGAAGGCTGTCGGACAGGGCGAATTGTTCTTCAACGTCCAGGACTACGGCGCAACTGGCGACGGAACCACCGACGACACAGCCGCATTCCAGGCAGCGATCAACGCGGCGTCCGCAGCCGTGTCCTCTGGAGAGTTTGCCGGGGCAGGCCGCGGCGCGGTCTACATTCCTCGGGGAAGCTACTGCATCGGAAACCTGCAACTGAAGGCGAACGTCACGATCCGCGGTAGTCACTTCCGTGCCGTCACGATCATCCCTACCGCAACTAGCGGGTTCACGTTCGGCACCTCCGGTCTGACGACCACGAACCGGATGACCTCGGTATGCCTCGAAGGGTTCACCATCGGCCCAACCTCGACGGTCGCGGGCCTTTCAGGAACTCGTCCGGCGGCAGGCGGGATCGACCTCAGCTTCACGCTGTGGTGCTCGATCAAGAGTGTCTACATCCACAACATCGCAGGCATCGGCATTAAGTTGACCGAGACCTACGACCTCAACACGTTCGACGTTCACCTGCTGTACGTGGGCGTCGACAGCAACTCTCCCGCCGTTCTGATGGCAGGAGACGCGGCTGATACGTGTAACGCAAACCACCACTTCGGGATGCGTATCGAACGGTGCCCCGTCATGCTTCGAGTGACAGGCGTGGATCGTGCCCCGGTCAACAACCAGTTCGTCGGGTGCAAGTTCGAGTGGAACGTTGCGGGTCAGCCGACCACGACAAGCGCAGGCATCTGGATCGAACACGGATTGCAGAACACGTTCACGTCCTGCATGTTCGTCTCGGACAGTGTCACCTATCCGCTGATCAGGATCGGCGCTGACACGGGATCGATGAGCGCCCAGGGCACCCGGTTCATTGGATGCGACTGGAATGCCAACGCAGCGACGGACGGCTGGGCGATGGAGACCACAGCCAAGGCCCTGGATGTGTCATTCGTTGGATGCCACCTCAGGAACTTCGCGAAGGGCTTCGTGTTCAACGACTCCACCCGCGCATCGTTCACCAACCTGACCACGTTCAATGCCCTCGCGCCCGTCATTGTCTCCAACGGAGCGAAGCTGTCGGCCTGTGAGTTCCTGGAAACCAGGTCAACGACGTCGGGCTCCCACTACATCGTGCAGTTGAACGCCAATGCGATGGTTGCCGCCTGCTTCTTCCAGGGGGTGACCTCGGGAAACAAGCCGAACGGGATCTCGCAGGGAAGCAACTGCACCGTCACGGGGACGCGACTGAATCAGATCGTTGTCGGCACGTCGTTCTTCGGCACCGGCAGTAAGTGGCGGGCGAACAGGATGGACTCGGTCACCACCTCATTTGCAGGTTCGGCCAACTACGCGCTGAACAACTCCATCGAGGGTCAGGCCCCCGTATCGCTCACGCACTCCCGAGCATTGGAGGACACCGTCACCACTGCACTGCGGACAGCTCTGGTGAGCGCAGGGTTGGCGTATGACAACACTGTTGCCTAG

Tertiary structure

PDB ID
1d4a0faae965cef6a4ef3f11577f416ae92b7ae861b196acf3ba9aee7be73526
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8031
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50