Protein

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Genbank accession
QOE32163.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MALSRVIRTGNGTTTEFVVDFALGYLDEDNVTARVGDEVDGAGNPIYRTITFLSDTLMRISGAPAGNGVRVVFERTVEKEDTIVHFSNGDVMDEENLDLSFKQILMVVHEVLDGRFGQFDSNLDMGGFVIKNMGLPVDNGDAANKQYVDGRLATNESLLAQTITARNAAQASATSAGSSAGASATSASAAAASAAASETSRSQSANSATASATSASAAAASAASMTGSVTAAQTARAGAESARDTTLTYRDQAAGHVTSAQTAATASGNSATASETSRQASGTSATASANSATASQTSRLASEAARDTTITYRDEASASATASAGSATTSATHRDNAYKWASSGEDVQVDDGVRAGYSAYHWSKKAELAAGGGVSSWAGLIGTITTLQASTALSGSFLSLTGGTLTGRLVLPASTVDGAPLQLPHGVAPTTPVNGEMWTTTTGLLYRINGANRTSWDSSNLAQMPAAEANAGTSTTVRTISASILRGGINAAITGKADLAGAAFTGNISVAGTIDTTGNINLGSAGTRVQTDGNVIFSGSMSGNNGSDLNTALLGKAKKATVSTADPSGGVDGDTWYKV
Physico‐chemical
properties
protein length:579 AA
molecular weight: 58270,91400 Da
isoelectric point:4,93649
aromaticity:0,04836
hydropathy:-0,13592

Domains

Domains [InterPro]
IPR005604
6–114
IPR005604
QOE32163.1
1 579
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage Paso
[NCBI] 		2767574 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOE32163.1 [NCBI]
Genbank nucleotide accession
MT708546.1 [NCBI]
CDS location
range 38137 -> 39876
strand +
CDS
ATGGCGCTTTCGCGGGTTATTCGAACCGGCAATGGCACTACGACTGAGTTCGTAGTAGACTTCGCCCTTGGGTATCTCGATGAGGACAACGTTACTGCCCGCGTGGGTGATGAAGTTGATGGTGCTGGCAACCCGATCTATCGGACCATTACCTTCCTGTCTGATACTCTGATGCGGATCAGTGGTGCGCCCGCCGGTAACGGTGTGCGTGTAGTCTTTGAACGTACTGTTGAGAAAGAGGACACAATCGTCCACTTCTCCAATGGTGACGTCATGGATGAAGAGAACCTTGATCTGTCGTTCAAACAAATTCTTATGGTCGTCCATGAGGTACTCGACGGTCGTTTCGGCCAGTTCGACAGTAACCTCGATATGGGTGGCTTCGTAATCAAGAACATGGGTCTGCCCGTAGACAATGGCGATGCTGCTAACAAGCAGTACGTTGACGGTCGTTTGGCTACCAATGAAAGCTTGCTTGCACAGACGATCACAGCGCGAAATGCCGCGCAGGCTTCCGCCACTTCGGCGGGGAGTTCTGCGGGTGCATCGGCAACGTCAGCATCCGCTGCCGCCGCCTCCGCTGCTGCCTCAGAGACTTCGCGTTCGCAATCGGCCAATAGTGCCACCGCTTCCGCAACCTCTGCCAGCGCCGCCGCAGCGTCCGCTGCTTCGATGACTGGATCGGTGACTGCCGCCCAAACGGCCCGCGCCGGGGCAGAATCCGCACGAGACACGACTTTGACCTATAGGGATCAGGCCGCAGGCCATGTGACCTCGGCTCAGACCGCAGCCACGGCCTCTGGCAATTCTGCGACTGCATCCGAGACATCCCGACAGGCATCCGGTACGAGTGCAACCGCGTCTGCAAACAGTGCTACCGCATCCCAGACTTCGCGTCTGGCTTCGGAAGCTGCCCGCGACACGACGATCACCTATCGCGATGAGGCATCCGCGTCCGCTACTGCATCCGCAGGATCGGCCACGACCTCTGCTACACACCGAGACAATGCCTACAAGTGGGCTTCATCTGGTGAGGATGTGCAGGTTGATGATGGTGTCCGTGCAGGATATTCGGCATACCACTGGTCTAAGAAGGCCGAGCTTGCTGCCGGTGGCGGTGTTAGCTCGTGGGCCGGATTGATCGGTACGATCACGACTTTACAGGCATCCACAGCATTGAGCGGTTCATTCCTCTCTCTTACTGGCGGTACGCTCACAGGTCGTCTGGTATTGCCCGCATCTACTGTGGACGGTGCACCACTACAACTCCCGCACGGCGTGGCTCCAACCACTCCTGTAAACGGTGAAATGTGGACTACGACCACTGGTCTGTTGTATCGCATCAACGGTGCTAACCGCACTTCATGGGATAGCTCCAACTTGGCGCAAATGCCAGCAGCAGAAGCAAACGCGGGTACTTCAACTACGGTTCGGACTATCTCCGCTTCTATCCTACGTGGTGGTATCAATGCCGCTATAACTGGTAAAGCCGACCTCGCTGGTGCCGCCTTCACAGGAAACATTTCTGTAGCGGGCACTATCGATACGACTGGCAATATCAACTTGGGTTCTGCCGGAACTCGCGTACAGACGGATGGAAACGTGATTTTCTCTGGAAGTATGTCAGGCAACAACGGTAGTGACCTTAATACGGCGCTTCTCGGCAAAGCAAAGAAAGCAACCGTGTCCACTGCCGATCCTTCGGGCGGCGTAGATGGAGACACATGGTATAAGGTATAG

Tertiary structure

PDB ID
47d0319a89beca0b6649520887983a90308e7305b95a3b83f7dbecec40379d23
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6571
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium japonicum phage Paso McBee,D.B., Ravindran,A., Newkirk,H., Gonzalez,C., Young,R. and Liu,M. 2021-02-04 — GenBank