Protein

View in Explore
Genbank accession
XXK85740.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
TF
Evidence Phold
Probability 1,00
Protein sequence
MAAGTLSVTNNSKAVVGVGTTFTAFKAGDFLTLVVGQVPYTVAIASIESATALTLVLPFDGPTATGLAWDGVKRDTMSLATMGVTVQAQKALRLMIADENNWRAIFGDAEEITVTLPNGQVMQGMSWGYLSQLMKQIDPVEMRDLQQQAAASEAAAQGFRNEAEGFKTETAGIRDATNTIKTQTDQIKTDTQAIKTQTDQIKTDTQAIKDQTNQIKTDTGVIRDQANTAKTDAQAARDAAQGYRDEAEDFKNAIDPTQFMKKSQNLADVADKSSARANLGLGSVATENTVPIGKGGTAATTAAAARANLGVGDDSNVKHATLRLNGGESLVFDDVERNGLALSNVSYGIDSWVGFTMHKWYADWTRAGIVRAANTQMSDYRIHTWKNGVSEALFRFMPDQRLISGNSGNPSVNEFQKAPLSDRDLKKEIQYTDGEESYNRVRQWLPAMFKYKESDVQRYGLIAQDLARIDPEYVHLLPGYAIYEDIKGVDEEGNEVVVDRKEIGYTDDVLSLDSNVLLMDLCAAFVHLLRKVEKLEGK
Physico‐chemical
properties
protein length:538 AA
molecular weight: 58684,06340 Da
isoelectric point:4,96099
aromaticity:0,07063
hydropathy:-0,36654

Domains

Domains [InterPro]
Coil
142–162
Coil Coil IPR030392
IPR030392
421–538
IPR030392
XXK85740.1
1 538
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Pandora71
[NCBI] 		3446500 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXK85740.1 [NCBI]
Genbank nucleotide accession
PV841870 [NCBI]
CDS location
range 26888 -> 28504
strand +
CDS
ATGGCAGCGGGTACTCTATCCGTAACGAATAACAGCAAGGCGGTTGTCGGCGTCGGCACAACGTTCACCGCGTTTAAAGCTGGCGACTTCTTAACGCTGGTGGTAGGGCAAGTCCCCTACACCGTGGCAATCGCGTCCATTGAAAGCGCAACCGCGCTTACGCTTGTGCTGCCGTTCGACGGCCCAACGGCAACCGGCCTCGCGTGGGATGGCGTTAAGCGCGATACCATGTCGCTGGCAACGATGGGCGTTACCGTACAGGCGCAAAAAGCATTGCGCTTGATGATCGCAGATGAAAACAACTGGCGTGCAATCTTCGGCGACGCTGAAGAAATCACGGTCACGCTGCCGAACGGGCAGGTGATGCAGGGTATGTCATGGGGCTACCTGTCGCAGTTGATGAAACAGATCGACCCAGTGGAAATGCGCGACCTGCAACAACAAGCAGCCGCATCGGAAGCAGCCGCGCAAGGATTTCGCAATGAGGCCGAAGGCTTCAAGACCGAGACGGCGGGTATTCGCGACGCCACCAATACCATCAAGACGCAGACGGACCAGATTAAGACGGATACGCAGGCCATCAAGACGCAGACGGACCAGATTAAGACGGATACGCAGGCCATCAAGGACCAGACGAACCAAATCAAGACTGATACTGGCGTTATTCGAGATCAGGCCAATACAGCGAAGACGGACGCGCAAGCCGCCCGCGATGCCGCGCAGGGGTATCGGGATGAAGCCGAAGACTTCAAAAACGCGATCGACCCTACGCAATTCATGAAGAAGTCGCAGAACCTGGCAGACGTCGCAGATAAATCGTCGGCACGCGCTAATCTTGGTCTGGGGTCTGTAGCTACGGAGAACACCGTACCCATCGGGAAAGGCGGCACTGCGGCGACAACGGCAGCGGCAGCACGCGCTAATCTTGGCGTTGGTGATGATAGTAACGTTAAACACGCAACATTACGTCTGAATGGTGGTGAGTCATTAGTATTCGATGACGTCGAAAGAAACGGCTTAGCTCTGTCGAACGTATCGTACGGGATTGACAGTTGGGTAGGCTTCACCATGCACAAATGGTATGCAGACTGGACACGCGCAGGCATTGTTCGCGCTGCTAACACTCAAATGTCGGACTACCGGATTCATACGTGGAAGAACGGTGTTTCCGAGGCGCTATTCCGCTTTATGCCTGACCAAAGGCTGATTAGTGGTAACTCCGGCAACCCTTCGGTTAACGAGTTCCAGAAAGCGCCGCTATCGGACCGCGACCTTAAAAAAGAAATCCAATACACTGACGGCGAGGAAAGCTACAACCGCGTTCGTCAATGGCTTCCGGCAATGTTCAAGTATAAGGAGTCGGACGTACAGCGATACGGCCTTATCGCACAGGATCTGGCAAGGATTGACCCAGAATATGTGCACTTGCTGCCGGGTTATGCCATTTATGAGGATATCAAGGGGGTGGACGAGGAAGGGAACGAAGTTGTAGTCGACCGAAAGGAGATCGGGTATACAGACGATGTGCTGTCGCTTGATAGTAACGTGTTGTTAATGGATCTGTGCGCCGCCTTCGTTCACCTGCTGCGGAAAGTGGAGAAGCTAGAAGGTAAATAA

Tertiary structure

PDB ID
b8c1eb35acf362a9275700888112b7d354857cbbbf935784d58fda689df31b40
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8270
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages against environmental Escherichia coli isolates and their phage resistance trade-off Soukou,V., Dioli,C., Zrelovs,N., Tseperka,M., Dioli,C., Svanberga,K., Perra,M., Freri,M., Kazaks,A., Vogiatzaki,C., Skliros,D. and Flemetakis,E. 2010-06-04 — GenBank