Protein

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Genbank accession
AHJ10509.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MATLRPRFDRIWAASGQMADPGLAKYAQGWTAEIPTYEVLNFLQNRTDTALIALAETGIPEWGDDVTYRRGAPVWDNEAVYYAKVASPLKTKRPSQNADQWGKSAITYADTDFLSLSARINAHAAATNNPHKVTSDQVGTYKTGVIDQKIAVVQNDLNAFKARRDNPHAVTAVQAGAVPITGGIYQGQVTMSHSETLFAPSSGNYAMVGSSAVAGIRAGKNHLGIEPSTGRAIFLKDGVKSYLLSEAEYKEYRETVEAEYAIPTPYYEIAALSDIHLRHGIGSSGITRPSSAQYVDRAGTNVTAPAKYPRHTANGLLLDGRINEALSVTAQGNVSGLHTFTMNFEGDWIVGIKTLFAVDASPSERLRILADKTVELTVSDNGASKSYKTPPLAGASFNITWVRTSTSMQVFIDGEKMIGVAGVFGQFPTTAKIMYHGLNEAGSAALRSVRLWRQALTAKQVSTI
Physico‐chemical
properties
protein length:464 AA
molecular weight: 50067,78770 Da
isoelectric point:8,72691
aromaticity:0,08621
hydropathy:-0,21616

Domains

Domains [InterPro]
IPR013320
351–463
IPR013320
AHJ10509.1
1 464
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage Spp001
[NCBI] 		1445859 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella putrefaciens
[NCBI] 		24 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Shewanellaceae > Shewanella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHJ10509.1 [NCBI]
Genbank nucleotide accession
KJ002054 [NCBI]
CDS location
range 7 -> 1401
strand -
CDS
ATGGCTACCTTAAGACCTCGCTTTGACCGAATCTGGGCGGCCTCTGGGCAAATGGCGGATCCAGGTTTAGCGAAGTATGCGCAGGGTTGGACTGCAGAAATTCCAACATATGAAGTTCTCAACTTCCTCCAGAACCGTACAGATACAGCCCTTATCGCGTTAGCGGAAACAGGTATCCCCGAATGGGGCGACGATGTTACGTATCGTCGTGGTGCGCCTGTATGGGACAACGAAGCTGTGTACTACGCGAAAGTGGCGTCTCCGCTAAAAACGAAACGCCCTTCGCAAAACGCAGATCAATGGGGAAAGAGTGCGATTACATACGCAGATACTGATTTCCTATCTTTATCCGCGAGAATCAACGCCCACGCGGCTGCAACGAACAACCCGCACAAAGTTACGTCTGACCAAGTAGGGACTTACAAAACTGGAGTAATTGACCAGAAGATCGCGGTAGTTCAGAATGACCTAAATGCATTCAAGGCCCGCAGAGACAACCCACATGCCGTTACTGCGGTGCAAGCAGGTGCTGTACCTATTACAGGTGGTATTTACCAAGGGCAAGTAACTATGTCTCACTCCGAGACTCTATTTGCCCCAAGCTCCGGAAACTACGCGATGGTAGGATCATCTGCTGTTGCAGGTATCCGCGCAGGTAAGAACCATTTAGGGATTGAGCCCTCCACGGGTCGCGCGATCTTCTTGAAAGACGGCGTCAAGTCTTACTTGTTAAGTGAAGCTGAATATAAGGAATACCGTGAAACGGTGGAAGCTGAATATGCGATCCCGACGCCGTACTACGAGATTGCTGCGCTTAGTGACATCCACCTCCGCCACGGAATTGGATCGTCAGGAATCACTCGTCCATCATCAGCTCAATACGTTGACCGTGCAGGAACCAACGTCACCGCGCCTGCGAAGTACCCACGGCACACCGCCAATGGTCTCCTCCTTGACGGGCGAATCAATGAAGCACTCAGTGTAACAGCACAAGGCAACGTGTCTGGGCTGCACACATTTACGATGAACTTCGAAGGCGACTGGATCGTTGGTATCAAAACACTGTTCGCAGTAGATGCATCGCCCTCAGAGCGGCTTCGGATTCTTGCAGATAAAACTGTTGAACTGACCGTGTCTGATAACGGAGCGTCAAAGAGTTACAAGACTCCACCGCTTGCGGGCGCGTCCTTTAATATTACTTGGGTTCGCACTAGTACCTCGATGCAGGTATTTATCGATGGAGAGAAGATGATTGGCGTGGCAGGTGTCTTCGGGCAGTTTCCCACGACAGCAAAAATCATGTACCATGGGCTAAACGAGGCCGGTTCAGCTGCGCTACGTTCAGTGCGGCTGTGGCGACAAGCGTTAACAGCGAAACAAGTATCAACTATCTAG

Tertiary structure

PDB ID
b9a649fe1724e3f904c65afaa871ac09a32f9043a4dc91d99571d82ed0ad9631
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7595
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The novel Shewanella putrefaciens-infecting bacteriophage Spp001: Ggenome sequence and lytic enzymes Han,F. 2014-06-01 — GenBank