Protein

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Genbank accession
UFK26912.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARPFEGALNDLLQGVSQQVPRERVAGQCSAQVNMLSDPVTGIRRRPGSLFVSVHDFGPIGEGDALYTQYLERGADGRHLVINTNTGGWWLLDREAKNIVSEGNLSYLLAADRRSIQTTSMGGVTYILNTEKRPSATTDNSDKKDPKTTGFYFVKSGAFSKEYDISVVWSEGSQTVTYTTPDGTTAGDADQSVPEAIARKLVEALIAVGVDFAVRVGPYIYFELITGTDLKITSTSGSPYIGYSNQSQVNLETDLPARLHPSADGALCAVGQSERALVWYRYSSEKGVWLESGDYNSVTAISVDVPYKIVDDNMEQHIMEGRLAGDDLTNPAPTFLEERRITGIGTFQGRLVLLSGAYVCMSASGEPDRFFRSTVSSLDPTDRIDIASGSAQNSVFRQALQFNKDLILLGDSTQAVVPSLQQLLAPDNASVVLTSDLACNAFVAPVTTSQTLMYPAPRSEAFSAVLELVPSQYTSSQYVSQDVTTHIPRYIEGEARFMQSASAANIVLMATTGDNRQVIVHEYHFTSQGKVHQAWHKWVFPYRVASLHFARDRVVLFAADDAGSTDKITISTIDPKQGGVTFDVDRLPHLDSMSIVPVNDGKGIVPIYMRPWVSEGKLTGSVATGALASEEVAIDVDEVSWEFTVEPGFKDSQIYLGFCYESLFAPTPPMLKDQNDTLISTAPVRLLRYELTTRNTGEFDVRIVDPTIGLDYSNSKTSLVFGTDDVQLNQALVSDLSRVPVPCRSNAQSTEMYLSTDGTQDMNILEIEYIIRYNQRRRRV
Physico‐chemical
properties
protein length:780 AA
molecular weight: 85600,99350 Da
isoelectric point:4,87220
aromaticity:0,08590
hydropathy:-0,20103

Domains

Domains [InterPro]
IPR058003
9–780
IPR058003
UFK26912.1
1 780
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP_AL-1
[NCBI] 		2894580 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFK26912.1 [NCBI]
Genbank nucleotide accession
OK349506 [NCBI]
CDS location
range 24307 -> 26649
strand +
CDS
ATGGCTCGACCATTTGAGGGTGCATTGAATGACCTGCTGCAAGGTGTGTCCCAACAAGTTCCACGTGAGCGTGTGGCTGGACAATGCTCTGCACAGGTTAACATGCTGTCCGACCCAGTAACAGGTATCCGCCGTCGTCCCGGTAGCCTGTTCGTGAGTGTGCACGATTTCGGCCCGATTGGTGAGGGTGACGCGCTGTACACGCAGTATCTTGAACGAGGTGCTGATGGACGACACTTAGTAATCAACACCAACACAGGCGGCTGGTGGCTCTTAGACCGAGAGGCTAAGAACATCGTGAGTGAGGGTAACTTGTCTTACCTCCTAGCGGCTGACCGTCGCAGTATCCAGACTACCAGTATGGGTGGTGTCACGTACATTCTTAACACTGAGAAGCGTCCGTCTGCAACGACTGACAACTCTGACAAGAAAGACCCGAAGACAACAGGCTTCTACTTCGTCAAGAGTGGTGCGTTCAGTAAAGAGTACGATATTTCTGTAGTGTGGTCTGAGGGTAGCCAAACCGTGACATACACCACGCCTGATGGTACAACCGCAGGTGACGCAGACCAATCTGTACCGGAAGCAATCGCACGTAAACTCGTGGAAGCTCTGATTGCAGTTGGTGTGGACTTCGCTGTGCGTGTTGGCCCGTATATCTATTTCGAACTAATCACAGGTACTGACCTTAAAATCACCAGTACGTCAGGTTCGCCTTACATTGGCTACTCAAACCAATCACAGGTAAACCTAGAGACTGACCTCCCTGCGCGTCTGCATCCGTCTGCTGATGGTGCGTTGTGTGCTGTAGGTCAATCAGAACGTGCGCTTGTGTGGTATCGTTACAGTTCCGAAAAGGGTGTTTGGTTGGAATCTGGTGACTACAACTCTGTGACCGCTATTAGCGTGGATGTGCCCTATAAGATTGTCGATGACAACATGGAGCAACATATCATGGAGGGGCGTCTCGCAGGTGATGACTTAACTAACCCTGCACCGACATTCCTTGAAGAACGCCGCATCACTGGTATCGGGACGTTCCAAGGTCGCTTAGTGCTTCTATCTGGTGCGTACGTCTGTATGAGTGCCTCTGGTGAACCAGACCGTTTCTTCCGCTCTACCGTGAGTTCCCTTGACCCAACAGACCGTATTGACATTGCATCCGGTTCGGCTCAGAACTCAGTGTTCCGCCAAGCGTTGCAGTTCAACAAGGACTTGATTCTACTTGGTGACAGTACACAGGCGGTAGTACCGTCCCTGCAACAGTTACTTGCGCCTGATAACGCAAGCGTGGTGTTGACCTCAGATTTGGCCTGTAATGCGTTTGTAGCACCTGTTACAACCTCACAGACCCTGATGTACCCTGCACCTCGAAGCGAAGCATTCAGCGCAGTTCTGGAGCTTGTACCATCACAGTACACCTCGTCTCAGTACGTATCTCAAGACGTTACGACTCACATCCCTCGTTACATTGAGGGTGAGGCTCGTTTCATGCAGAGTGCGAGTGCTGCGAACATCGTACTAATGGCAACTACTGGCGACAACCGTCAGGTGATTGTTCATGAGTACCACTTCACAAGTCAAGGTAAAGTGCACCAAGCATGGCACAAATGGGTGTTCCCGTATCGTGTCGCTAGTCTACACTTTGCGCGTGACCGTGTTGTACTGTTTGCCGCAGATGATGCTGGTAGTACTGACAAAATCACTATCTCGACCATCGACCCTAAGCAGGGTGGTGTGACGTTTGATGTTGACCGCTTACCACACCTAGACTCGATGAGCATTGTGCCCGTCAATGATGGTAAGGGTATCGTGCCAATCTACATGCGTCCGTGGGTATCTGAGGGTAAGTTGACTGGTTCTGTTGCTACAGGTGCGTTAGCGTCTGAGGAAGTGGCTATTGATGTGGACGAGGTTTCATGGGAATTCACTGTAGAGCCGGGTTTCAAAGACTCGCAAATCTACTTAGGCTTCTGCTATGAGTCACTGTTTGCACCAACGCCGCCTATGCTGAAAGACCAGAACGATACTCTAATCAGTACTGCTCCGGTTCGACTGTTGCGTTATGAGTTAACGACTCGAAATACAGGTGAATTCGATGTACGCATCGTTGACCCTACTATCGGGCTAGACTACTCAAACAGCAAAACCAGTCTAGTGTTCGGCACTGACGACGTTCAGTTGAACCAAGCTCTAGTGTCTGACTTGTCACGTGTCCCTGTACCGTGTCGAAGCAATGCGCAGTCCACCGAAATGTACTTGAGTACTGACGGTACACAGGATATGAACATTCTGGAAATTGAATACATCATTCGTTACAACCAACGCCGACGTCGCGTATAA

Tertiary structure

PDB ID
0c7e29255b8388ae9676f74447eed30d6396b66e35f062e719fe1e866308e5e5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2499
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and biological characterization of the novel phages vB_VpaP_AL-1 and vB_VpaS_AL-2 infecting Vibrio parahaemolyticus associated with acute hepatopancreatic necrosis disease (AHPND) Gonzalez-Gomez,J.P., Lopez-Cuevas,O., Castro-Del Campo,N., Gonzalez-Lopez,I., Martinez-Rodriguez,C.I., Gomez-Gil,B. and Chaidez,C. 2022 35219760 GenBank