Protein

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Genbank accession
UYE98569.1 [GenBank]
Protein name
putative structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYVIKGDVNVTGNITVQSKNVGTSITTTGNSTVYLADTSGHVDLPLPSKSDVDYILKQLPLSQYGALNNNAPGVAGTFDGGSTLAYYSAMPVLLEADGSLVYLRPGTNGSSVNYYYTYINNPNASMQPFTTINSYYTGSWKTILFHDSDAKTCLTFEEVGNNVLHLVLTNGTLTKANHQSATIARNLIPYTIMNSIVIGSYMYIVTLYSSVNDLNNPTGIYYNGNDPFEFVLYRIPVSQIQTGSVTTVEQISGITGNTLYGDSQGSQGYIRIADLWQSTIESGNKSWIRYSSALNGVAGYTYTIIGSVKCIFDGTNLIISMNNNTFVRNNSLRSDTRPAFRIFYNVSTKAFTTDLTTGSPLVATGGVSGNITWTHPYSVNSSNIFGNGTAVSDSLNGTWYITENGTQYYIREKYVLSDNYYVYSGKINNFTNKVDAYNVRGRTFNSVVQYNVYADYASRVGDQLMGGIPISTSRVLFSGTGTYEGTKYLKYSKGISDIGTTRTYTYNSFKRGTITGYGPQATRLPLPTATENATYGGVSYCDSSGNVTFFGTVFVEGSVLSAGYQLNPTTLLYDKTISISNTVLTNLKNSILSNQGLSPSSSTIALYYSPNTSYFASVACVTSLNSGGGGNMILASVNCTADTSSVLTATLNTVINNYSDASFISTSTNGTATSEMRRHGGLCVVNYSDFTYVSLPHLINVGVAGDSREYSYAGVKSGNTLTSLIMSNSYHAPDISPGSREYSYIPNYGFGYYVFQDTDQGTKLIFKRCGSTLSEFNSNMASGTGTDTVILAQDVPQGFYLYFTEVTPLFLSGQYFDVPITAIDLSTVQANPGNTTFYVYIKLALGTPSYVVSTTTLPETDTQMFLGTIVTDGTKVATLNIKKVSRLDTYRPSTTQIGSAFPVSTGNPTQTGTITW
Physico‐chemical
properties
protein length:917 AA
molecular weight: 99110,14900 Da
isoelectric point:5,95556
aromaticity:0,11778
hydropathy:-0,11592

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE98569.1
1 917
Domain Start End Length (AA) Confidence
N-terminal 1 53 53 0,9254
Central domain 54 304 252 0,8667
C-terminal 305 917 612 0,3578
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-53
Central
54-304
C-terminal
305-917

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XbC2
[NCBI] 		2978503 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE98569.1 [NCBI]
Genbank nucleotide accession
OP292654 [NCBI]
CDS location
range 79167 -> 81920
strand +
CDS
ATGGCATATGTCATTAAAGGTGATGTGAATGTCACCGGAAATATAACAGTACAAAGTAAAAATGTAGGTACTAGTATCACAACCACTGGTAATAGTACTGTTTACTTGGCTGATACATCTGGACACGTAGACTTACCTTTACCGTCCAAATCTGATGTAGATTACATTTTAAAACAACTTCCTCTATCACAATATGGTGCGTTGAATAACAACGCACCTGGTGTGGCAGGAACATTTGATGGTGGTAGCACACTGGCATACTATTCAGCTATGCCAGTTCTATTAGAAGCTGATGGTTCTTTGGTTTATCTTCGCCCAGGAACTAATGGTAGTTCTGTAAATTATTACTACACTTATATAAACAATCCAAATGCTTCAATGCAACCATTCACCACTATTAATTCTTATTATACTGGTTCGTGGAAGACAATTTTGTTTCATGATAGTGATGCAAAAACATGCTTAACATTTGAAGAAGTGGGGAATAATGTACTTCATTTAGTACTTACGAATGGTACTTTAACTAAAGCAAATCATCAATCAGCAACTATTGCTCGTAACCTTATACCGTACACTATTATGAATTCTATAGTTATTGGTTCATATATGTACATCGTTACACTTTATTCATCAGTTAATGATCTTAATAATCCAACTGGAATATACTATAATGGCAATGATCCATTTGAATTTGTTTTATACAGAATACCTGTTTCACAGATTCAGACAGGTTCAGTAACAACGGTTGAACAAATATCTGGAATAACCGGTAATACACTATATGGTGATTCACAAGGTTCACAAGGTTATATTCGTATAGCAGATTTATGGCAAAGCACAATTGAAAGTGGTAATAAATCTTGGATTAGATACAGTTCAGCACTCAATGGAGTTGCTGGATATACATACACAATTATTGGTTCAGTAAAATGTATTTTTGATGGAACAAATTTAATTATCTCTATGAACAATAACACATTTGTTAGAAATAATTCATTACGTTCTGATACTAGACCAGCTTTTAGAATTTTCTATAATGTTAGTACTAAAGCATTTACTACAGATTTAACAACTGGTTCGCCTCTAGTTGCTACTGGTGGTGTTAGTGGTAATATCACATGGACACATCCATATTCTGTAAACAGTTCAAATATATTCGGTAATGGTACAGCGGTATCAGATAGTTTAAATGGAACTTGGTATATTACTGAAAATGGAACACAATATTACATTCGAGAAAAATATGTTCTTAGTGATAACTATTACGTATATTCTGGTAAAATTAATAACTTCACTAATAAAGTAGATGCTTATAATGTTCGTGGTAGAACATTTAATAGTGTGGTACAATATAATGTATACGCAGATTATGCTTCACGTGTTGGTGATCAACTGATGGGTGGGATTCCTATTAGTACTAGTAGAGTGTTGTTTAGCGGTACTGGTACATATGAAGGTACAAAATATTTGAAATATTCTAAAGGTATTTCTGATATTGGCACAACAAGAACATACACATATAATTCATTTAAACGAGGTACTATTACTGGTTATGGACCACAAGCTACTCGCTTACCATTACCAACTGCTACTGAAAATGCAACATATGGTGGTGTATCATATTGTGATTCTTCAGGAAATGTAACATTCTTTGGAACTGTATTCGTTGAAGGCTCTGTATTATCCGCAGGTTATCAATTGAATCCAACAACTTTGTTGTATGATAAAACTATTTCTATTTCAAATACGGTACTAACTAATTTAAAAAATAGCATATTATCAAACCAAGGATTATCACCATCTTCTAGTACTATTGCGTTGTATTATTCTCCTAATACTTCATATTTTGCGAGTGTTGCGTGTGTAACCAGCCTTAATTCTGGTGGTGGCGGTAATATGATTTTAGCATCAGTTAACTGTACTGCTGATACTTCTTCAGTACTGACGGCAACCCTAAACACTGTAATTAATAATTATAGTGATGCTTCATTTATATCAACATCAACAAACGGTACAGCAACATCAGAGATGCGTAGACATGGTGGTTTGTGTGTAGTTAATTATAGTGATTTTACATATGTATCTTTACCACACTTAATAAATGTTGGAGTGGCAGGTGATTCTCGTGAATATTCATACGCTGGTGTTAAATCAGGAAATACTTTAACTTCATTGATAATGTCTAATAGCTATCATGCACCAGACATTTCACCAGGTTCTCGTGAATATAGCTATATCCCTAACTATGGTTTTGGATATTATGTATTCCAAGACACAGATCAAGGAACAAAACTTATATTCAAACGTTGTGGTAGTACGCTATCAGAGTTCAATTCAAATATGGCTTCTGGTACAGGAACAGATACAGTAATTCTAGCTCAAGATGTTCCTCAAGGATTTTATTTGTATTTTACTGAAGTAACTCCATTATTCCTAAGTGGGCAATACTTTGATGTTCCTATTACAGCAATTGACTTAAGTACAGTACAAGCTAACCCAGGAAATACAACATTCTATGTTTATATAAAATTGGCGTTAGGAACTCCATCTTATGTAGTAAGTACTACAACCTTACCTGAAACTGATACGCAAATGTTTTTAGGAACAATTGTCACGGATGGTACAAAAGTTGCTACGTTAAATATAAAGAAGGTTTCTAGACTAGACACATACAGGCCAAGTACTACCCAAATTGGTTCTGCGTTCCCTGTCAGTACTGGTAATCCTACACAAACAGGAACAATTACCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d958255cc61558a23961ced1f3e5e5a56cc114fafea05d78d60a0be8ed9878f0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2715
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi-Rangel,L., Villicana,C., Leon-Felix,J., Amarillas,L., Carrillo-Fasio,A. and Lightbourn-Rojas,L. 2024-07-15 — GenBank