Protein

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Genbank accession
YP_011992720.1 [GenBank]
Protein name
lateral tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,70
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGTSISSITASELTGAVEASAASAAAAKDSEIAAKESETNAKDSENLAAIYANSSETSATQSAASATEAERQASLSKDSADASATSAEESKGFRDSAELAAQNAEQSRLLAEQAKKDAEAAKTAAATSEQNAATSATESTNQATAATGSATKAGEYATAAKDSEIAAKTSELNAKDSEHESAISAGASEASASQSAISATQSAASATKSAESSAAAKTSETNAIESSAAAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAADSAASASDSKGFRDEAEAFAAQASTSALAAKNSETSTKTSETNSKASEAAAKLAQQDASDSANIATQAMTTTKSYRDEAEGFKNTATTAATTATEKALEAASSATTAGEKAVAASSSADRAETAAASAEQVTQASLKKDQNLADLTNKELAREALQVETVKRANAGQPGGYSAFQSPTTAYEMRIANDGGWRVVSNIDNGKTMPLLVDYGGTGALNAADARTNLALNRFSQADSSQTYVFSGDGTKKLFIDDAGTWGVWNNSIDVPIALPIYSGGTGAVNINDARANLGIGLFGNDTQFTTMTDPSNKYQVFVRDTGDWGCVSPGSSRAALPIISGGTGATDAAGAARSLKVMGDGLPDNRLDAPYLSSGVYYAGDDSYVGGSGKPFNYTQILNLAEQNGNVGNWTQLGFSILSNTAPVIRRRNAYPALLSDWSTFVVKGLNATIDTNGFYKSASPIVKLKGDGSIETNSESEGATSSRLEKGVYIISGVLGFNSNPEWGGVDGGFVIPTNNNGLPLLWVDYEISAQGDILIKTYHRVHENVPPFAKNTIQGVNNGDPIDIPSGRWIDLRVEMPADSIYNKAMEEARTPYEKAEKERLDLEEK
Physico‐chemical
properties
protein length:900 AA
molecular weight: 93045,16310 Da
isoelectric point:4,70743
aromaticity:0,05667
hydropathy:-0,42967

Domains

Domains [InterPro]
DC_0608
ATT
2–191
DC_0608 DC_0401 DC_0709
Coil
Unmapped
132–162
Coil DC_0415 IPR058008 Coil
YP_011992720.1
1 900
Architecture
ATT
STR
STR
ATT 2-191 | STR 211-500 | STR 528-899 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011992720.1
1 900
Domain Start End Length (AA) Confidence
N-terminal 1 364 364 0,7954
Central domain 365 563 200 0,3579
C-terminal 564 900 336 0,8420
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-364
Central
365-563
C-terminal
564-900

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage TrudiRoth
[NCBI] 		2851994 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus trudiroth
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011992720.1 [NCBI]
Genbank nucleotide accession
NC_105117.1 [NCBI]
CDS location
range 22292 -> 24994
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAATATCCTAAGTATACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGTGAACTAACAGGGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCAGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCGGAGAACCTAGCTGCAATTTACGCTAACTCTTCAGAAACTTCTGCAACTCAATCTGCTGCTTCTGCTACTGAAGCGGAGAGACAAGCTAGTTTATCTAAAGATAGTGCTGATGCCTCTGCTACGTCAGCTGAGGAATCCAAAGGATTCCGTGATTCTGCTGAACTTGCTGCACAAAATGCTGAACAGAGTCGTCTATTAGCTGAACAAGCTAAGAAGGACGCTGAGGCTGCTAAGACTGCTGCTGCTACTTCTGAGCAAAATGCTGCTACATCTGCTACTGAATCTACTAATCAGGCTACTGCTGCTACTGGTTCTGCTACAAAGGCGGGAGAATACGCTACCGCTGCAAAAGATTCCGAGATAGCGGCTAAGACTTCAGAACTTAATGCTAAGGATTCTGAGCATGAATCTGCTATTTCTGCTGGAGCTTCTGAAGCTTCTGCTTCTCAATCTGCTATTTCTGCTACTCAATCTGCTGCGTCTGCTACTAAATCTGCAGAATCATCAGCTGCGGCAAAAACTAGTGAAACTAATGCTATAGAATCATCAGCTGCAGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAAACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGCGAGACTAATGCTGCTGATTCTGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAACTAGTACAAAGACTAGCGAAACTAACTCAAAAGCTAGTGAAGCCGCCGCTAAGCTAGCTCAGCAGGATGCATCAGATAGCGCGAACATAGCTACGCAAGCGATGACCACAACCAAAAGCTATAGGGACGAAGCAGAGGGATTTAAAAATACCGCCACTACTGCTGCAACGACGGCAACAGAAAAGGCCCTAGAGGCCGCTAGTAGCGCTACAACGGCAGGTGAGAAAGCTGTTGCAGCAAGTAGTTCAGCTGACAGAGCTGAGACAGCGGCTGCATCCGCAGAGCAGGTTACGCAAGCGTCATTGAAGAAGGATCAGAACTTAGCAGACCTAACAAACAAAGAGTTAGCGCGAGAAGCGTTGCAAGTCGAGACAGTAAAACGCGCAAACGCAGGGCAGCCAGGAGGGTATTCTGCCTTTCAGTCACCCACTACGGCCTATGAGATGCGCATTGCTAACGATGGGGGCTGGCGAGTAGTTAGCAATATTGATAATGGTAAAACTATGCCGTTGTTGGTGGATTACGGAGGCACAGGAGCATTGAATGCAGCGGATGCGCGCACTAATCTGGCACTTAATCGTTTTTCACAAGCTGACAGCTCGCAGACCTATGTTTTTTCTGGCGATGGTACTAAAAAGCTATTCATTGATGACGCAGGAACGTGGGGCGTGTGGAATAACAGTATCGATGTGCCTATCGCTCTTCCAATTTATAGTGGTGGCACAGGAGCTGTGAACATAAATGATGCGCGGGCTAACTTAGGGATAGGCTTATTCGGCAACGACACCCAATTCACTACGATGACAGACCCATCAAATAAGTATCAGGTATTTGTTAGGGATACAGGCGATTGGGGATGTGTTAGCCCTGGATCATCTCGCGCAGCCCTCCCCATTATTTCTGGCGGTACTGGTGCAACTGATGCAGCTGGGGCCGCGCGCTCTCTTAAAGTTATGGGTGACGGGCTACCAGACAATCGACTAGATGCACCTTATCTTTCAAGCGGAGTATACTACGCGGGCGATGATTCTTATGTGGGGGGATCTGGTAAACCTTTCAATTACACTCAAATTCTGAATTTAGCCGAACAAAATGGTAATGTTGGTAACTGGACTCAACTGGGATTTTCTATTCTTTCAAACACCGCACCTGTGATACGTAGGCGTAATGCTTACCCCGCATTGCTTTCTGACTGGTCTACCTTTGTTGTGAAAGGCTTAAATGCTACAATCGACACTAATGGGTTTTATAAATCCGCGTCTCCTATCGTTAAATTAAAAGGAGATGGTTCCATAGAAACTAATAGTGAATCGGAAGGAGCTACCTCCAGTCGTCTGGAAAAAGGAGTCTATATAATTTCCGGGGTTCTTGGGTTTAACTCTAATCCTGAATGGGGTGGTGTAGATGGTGGATTTGTTATTCCCACAAATAATAACGGTTTACCTTTACTGTGGGTAGATTATGAAATCAGTGCGCAAGGTGACATTCTTATAAAGACATATCACAGGGTGCATGAAAACGTTCCACCTTTTGCAAAAAATACAATACAGGGAGTTAATAACGGAGATCCCATTGATATTCCTTCTGGACGTTGGATAGATTTAAGGGTTGAAATGCCAGCCGATAGTATTTATAACAAAGCCATGGAAGAAGCTCGTACCCCCTATGAGAAAGCAGAAAAGGAAAGGTTAGATCTTGAAGAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b5a27390a392964affcd8e7394248142951ae649467eb14e077540299c41bea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6191
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank