Protein

View in Explore
Genbank accession
YP_011992720.1 [GenBank]
Protein name
lateral tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,70
TF
Evidence Phold
Probability 1,00
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGTSISSITASELTGAVEASAASAAAAKDSEIAAKESETNAKDSENLAAIYANSSETSATQSAASATEAERQASLSKDSADASATSAEESKGFRDSAELAAQNAEQSRLLAEQAKKDAEAAKTAAATSEQNAATSATESTNQATAATGSATKAGEYATAAKDSEIAAKTSELNAKDSEHESAISAGASEASASQSAISATQSAASATKSAESSAAAKTSETNAIESSAAAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAADSAASASDSKGFRDEAEAFAAQASTSALAAKNSETSTKTSETNSKASEAAAKLAQQDASDSANIATQAMTTTKSYRDEAEGFKNTATTAATTATEKALEAASSATTAGEKAVAASSSADRAETAAASAEQVTQASLKKDQNLADLTNKELAREALQVETVKRANAGQPGGYSAFQSPTTAYEMRIANDGGWRVVSNIDNGKTMPLLVDYGGTGALNAADARTNLALNRFSQADSSQTYVFSGDGTKKLFIDDAGTWGVWNNSIDVPIALPIYSGGTGAVNINDARANLGIGLFGNDTQFTTMTDPSNKYQVFVRDTGDWGCVSPGSSRAALPIISGGTGATDAAGAARSLKVMGDGLPDNRLDAPYLSSGVYYAGDDSYVGGSGKPFNYTQILNLAEQNGNVGNWTQLGFSILSNTAPVIRRRNAYPALLSDWSTFVVKGLNATIDTNGFYKSASPIVKLKGDGSIETNSESEGATSSRLEKGVYIISGVLGFNSNPEWGGVDGGFVIPTNNNGLPLLWVDYEISAQGDILIKTYHRVHENVPPFAKNTIQGVNNGDPIDIPSGRWIDLRVEMPADSIYNKAMEEARTPYEKAEKERLDLEEK
Physico‐chemical
properties
protein length:900 AA
molecular weight: 93045,16310 Da
isoelectric point:4,70743
aromaticity:0,05667
hydropathy:-0,42967

Domains

Domains [InterPro]
Coil
132–162
Coil IPR058008 Coil
YP_011992720.1
1 900
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage TrudiRoth
[NCBI] 		2851994 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011992720.1 [NCBI]
Genbank nucleotide accession
NC_105117.1 [NCBI]
CDS location
range 22292 -> 24994
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAATATCCTAAGTATACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGTGAACTAACAGGGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCAGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCGGAGAACCTAGCTGCAATTTACGCTAACTCTTCAGAAACTTCTGCAACTCAATCTGCTGCTTCTGCTACTGAAGCGGAGAGACAAGCTAGTTTATCTAAAGATAGTGCTGATGCCTCTGCTACGTCAGCTGAGGAATCCAAAGGATTCCGTGATTCTGCTGAACTTGCTGCACAAAATGCTGAACAGAGTCGTCTATTAGCTGAACAAGCTAAGAAGGACGCTGAGGCTGCTAAGACTGCTGCTGCTACTTCTGAGCAAAATGCTGCTACATCTGCTACTGAATCTACTAATCAGGCTACTGCTGCTACTGGTTCTGCTACAAAGGCGGGAGAATACGCTACCGCTGCAAAAGATTCCGAGATAGCGGCTAAGACTTCAGAACTTAATGCTAAGGATTCTGAGCATGAATCTGCTATTTCTGCTGGAGCTTCTGAAGCTTCTGCTTCTCAATCTGCTATTTCTGCTACTCAATCTGCTGCGTCTGCTACTAAATCTGCAGAATCATCAGCTGCGGCAAAAACTAGTGAAACTAATGCTATAGAATCATCAGCTGCAGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAAACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGCGAGACTAATGCTGCTGATTCTGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAACTAGTACAAAGACTAGCGAAACTAACTCAAAAGCTAGTGAAGCCGCCGCTAAGCTAGCTCAGCAGGATGCATCAGATAGCGCGAACATAGCTACGCAAGCGATGACCACAACCAAAAGCTATAGGGACGAAGCAGAGGGATTTAAAAATACCGCCACTACTGCTGCAACGACGGCAACAGAAAAGGCCCTAGAGGCCGCTAGTAGCGCTACAACGGCAGGTGAGAAAGCTGTTGCAGCAAGTAGTTCAGCTGACAGAGCTGAGACAGCGGCTGCATCCGCAGAGCAGGTTACGCAAGCGTCATTGAAGAAGGATCAGAACTTAGCAGACCTAACAAACAAAGAGTTAGCGCGAGAAGCGTTGCAAGTCGAGACAGTAAAACGCGCAAACGCAGGGCAGCCAGGAGGGTATTCTGCCTTTCAGTCACCCACTACGGCCTATGAGATGCGCATTGCTAACGATGGGGGCTGGCGAGTAGTTAGCAATATTGATAATGGTAAAACTATGCCGTTGTTGGTGGATTACGGAGGCACAGGAGCATTGAATGCAGCGGATGCGCGCACTAATCTGGCACTTAATCGTTTTTCACAAGCTGACAGCTCGCAGACCTATGTTTTTTCTGGCGATGGTACTAAAAAGCTATTCATTGATGACGCAGGAACGTGGGGCGTGTGGAATAACAGTATCGATGTGCCTATCGCTCTTCCAATTTATAGTGGTGGCACAGGAGCTGTGAACATAAATGATGCGCGGGCTAACTTAGGGATAGGCTTATTCGGCAACGACACCCAATTCACTACGATGACAGACCCATCAAATAAGTATCAGGTATTTGTTAGGGATACAGGCGATTGGGGATGTGTTAGCCCTGGATCATCTCGCGCAGCCCTCCCCATTATTTCTGGCGGTACTGGTGCAACTGATGCAGCTGGGGCCGCGCGCTCTCTTAAAGTTATGGGTGACGGGCTACCAGACAATCGACTAGATGCACCTTATCTTTCAAGCGGAGTATACTACGCGGGCGATGATTCTTATGTGGGGGGATCTGGTAAACCTTTCAATTACACTCAAATTCTGAATTTAGCCGAACAAAATGGTAATGTTGGTAACTGGACTCAACTGGGATTTTCTATTCTTTCAAACACCGCACCTGTGATACGTAGGCGTAATGCTTACCCCGCATTGCTTTCTGACTGGTCTACCTTTGTTGTGAAAGGCTTAAATGCTACAATCGACACTAATGGGTTTTATAAATCCGCGTCTCCTATCGTTAAATTAAAAGGAGATGGTTCCATAGAAACTAATAGTGAATCGGAAGGAGCTACCTCCAGTCGTCTGGAAAAAGGAGTCTATATAATTTCCGGGGTTCTTGGGTTTAACTCTAATCCTGAATGGGGTGGTGTAGATGGTGGATTTGTTATTCCCACAAATAATAACGGTTTACCTTTACTGTGGGTAGATTATGAAATCAGTGCGCAAGGTGACATTCTTATAAAGACATATCACAGGGTGCATGAAAACGTTCCACCTTTTGCAAAAAATACAATACAGGGAGTTAATAACGGAGATCCCATTGATATTCCTTCTGGACGTTGGATAGATTTAAGGGTTGAAATGCCAGCCGATAGTATTTATAACAAAGCCATGGAAGAAGCTCGTACCCCCTATGAGAAAGCAGAAAAGGAAAGGTTAGATCTTGAAGAAAAATAA

Tertiary structure

PDB ID
4b5a27390a392964affcd8e7394248142951ae649467eb14e077540299c41bea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6191
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank