Protein

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Genbank accession
NP_040602.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVKISGVLKDGTGKPVQNCTIQLKARRNSTTVVVNTVGSENPDEAGRYSMDVEYGQYSVILQVDGFPPSHAGTITVYEDSQPGTLNDFLCAMTEDDARPEVLRRLELMVEEVARNASVVAQSTADAKKSAGDASASAAQVAALVTDATDSARAASTSAGQAASSAQEASSGAEAASAKATEAEKSAAAAESSKNAAATSAGAAKTSETNAAASQQSAATSASTAATKASEAATSARDAVASKEAAKSSETNASSSAGRAASSATAAENSARAAKTSETNARSSETAAERSASAAADAKTAAAGSASTASTKATEAAGSAVSASQSKSAAEAAAIRAKNSAKRAEDIASAVALEDADTTRKGIVQLSSATNSTSETLAATPKAVKVVMDETNRKAHWTVRH
Physico‐chemical
properties
protein length:401 AA
molecular weight: 39882,82540 Da
isoelectric point:5,51875
aromaticity:0,01746
hydropathy:-0,34938

Domains

Domains [InterPro]
IPR013609
1–134
IPR013609 Coil IPR005068
IPR008969
4–86
IPR008969 IPR051934
G3DSA:2.60.40.1120
5–99
G3DSA:2.60.40.1120
NP_040602.1
1 401
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Lambda
[NCBI] 		2681611 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_040602.1 [NCBI]
Genbank nucleotide accession
NC_001416.1 [NCBI]
CDS location
range 19650 -> 20855
strand +
CDS
ATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAATGATTTTCTCTGTGCCATGACGGAGGATGATGCCCGGCCGGAGGTGCTGCGTCGTCTTGAACTGATGGTGGAAGAGGTGGCGCGTAACGCGTCCGTGGTGGCACAGAGTACGGCAGACGCGAAGAAATCAGCCGGCGATGCCAGTGCATCAGCTGCTCAGGTCGCGGCCCTTGTGACTGATGCAACTGACTCAGCACGCGCCGCCAGCACGTCCGCCGGACAGGCTGCATCGTCAGCTCAGGAAGCGTCCTCCGGCGCAGAAGCGGCATCAGCAAAGGCCACTGAAGCGGAAAAAAGTGCCGCAGCCGCAGAGTCCTCAAAAAACGCGGCGGCCACCAGTGCCGGTGCGGCGAAAACGTCAGAAACGAATGCTGCAGCGTCACAACAATCAGCCGCCACGTCTGCCTCCACCGCGGCCACGAAAGCGTCAGAGGCCGCCACTTCAGCACGAGATGCGGTGGCCTCAAAAGAGGCAGCAAAATCATCAGAAACGAACGCATCATCAAGTGCCGGTCGTGCAGCTTCCTCGGCAACGGCGGCAGAAAATTCTGCCAGGGCGGCAAAAACGTCCGAGACGAATGCCAGGTCATCTGAAACAGCAGCGGAACGGAGCGCCTCTGCCGCGGCAGACGCAAAAACAGCGGCGGCGGGGAGTGCGTCAACGGCATCCACGAAGGCGACAGAGGCTGCGGGAAGTGCGGTATCAGCATCGCAGAGCAAAAGTGCGGCAGAAGCGGCGGCAATACGTGCAAAAAATTCGGCAAAACGTGCAGAAGATATAGCTTCAGCTGTCGCGCTTGAGGATGCGGACACAACGAGAAAGGGGATAGTGCAGCTCAGCAGTGCAACCAACAGCACGTCTGAAACGCTTGCTGCAACGCCAAAGGCGGTTAAGGTGGTAATGGATGAAACGAACAGAAAAGCCCACTGGACAGTCCGGCACTGA

Tertiary structure

PDB ID
ac2bd6ea7cfd28dded275aa83bf86237c45335c91eb2e9a4d84235944d847c68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8221
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Appendix I: A molecular map of coliphage lambda Daniels,D.L., Schroeder,J.L., Szybalski,W., Sanger,F. and Blattner,F.R. 1983 — GenBank
Appendix II: Complete annotated lambda sequence Daniels,D.L., Schroeder,J.L., Szybalski,W., Sanger,F., Coulson,A.R., Hong,G.F., Hill,D.F., Petersen,G.B. and Blattner,F.R. 1983 — GenBank
Localization of the promoter p-att of the binding site of Escherichia coli polymerase on phage lambda DNA near the integration site Kravchenko,V.V. and Mikryukov,N.N. 1982 — GenBank
Control of late transcription in bacteriophage lambda Daniels,D.L. 1981 — GenBank
The primary structure of the phage lambda P gene completes the nucleotide sequence of the plasmid lambda-dvh93 Schwarz,E., Scherer,G., Hobom,G. and Kossel,H. 1980 — GenBank
Structure and function of two regions of DNA controlling the synthesis of prokaryotic RNAs Sklar,J.L. 1977 — GenBank
In vitro transcription products of lambda DNA: Nucleotide sequences and regulatory sites Dahlberg,J.E. and Blattner,F.R. 1973 — GenBank