Protein

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Genbank accession
AHB79909.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSEYNKTILTNEGIDLARRANKGTATFSLTRGVSSTDNLSEKTVEELQNLTQLPSIQQSVKLSDVGDTSDNSDTVLGVRMTFDNQNLKTGYNVHTVGIYAKEPDKNEILYGIATAKTPEYIPDFSEQTLFKFDFLMYLVIGRTDKVTVEVSPDDVYRKKEVYSKSEVDTAVAKLDKKNAEIVKSLSDYKLENSTYHTNFEKSVTDRLGTKADKTTVEQQLGTKADKSNTYTKDEVNSKVAPKADKGYVDSELNKKADKATTYTKTEVDNKIAGQVKSVNGHTANASGAVTLPTLTANVLTGYDVKNKAATFDNNAHFDANGLFSRWTVDQGVIGQLADAINAKLPIEAGDPNGDLLDYAGNKIVYWNGNGDGVKNLPPMNNKKWFFAVKLFYLGWGSVTVVDQDGSYWLNTKNDDIWTGWRSVITNEHLKKLKFVKQSLDQNGNIFQDTKFVTQEADGTYKINIFDSDWTANKVSWLLNNTKSYSIQNNTDLNNVKNTGFYNAAGPSGLKNSPVSAWFSMSVNANQWNGQQTLYDTNSGQLYVRTWNSTRFTDWQRIANAGDLTNQSITSITDYDVASEGWHNTQVGKFDPSGHFANLLVDAGALKPIAEAINNLNTNLTTMRTELMNLKKRTDYNTPQGEFNNTTVNLNNLRSTGMYRLSNCHVQSGPYPTDNAHWVYVKVAVFDANTVYQTLYEGDNMYGRKSSSTSAWGQWHEYLNRPI
Physico‐chemical
properties
protein length:722 AA
molecular weight: 80562,31900 Da
isoelectric point:6,01711
aromaticity:0,10111
hydropathy:-0,62881

Domains

Domains [InterPro]
cd19958
488–558
cd19958 Coil
AHB79909.1
1 722
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage phi jlb1
[NCBI] 		1416334 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus gasseri ADH
[NCBI] 		1395514 Bacteria > Firmicutes > Bacilli > Lactobacillales > Lactobacillaceae > Lactobacillus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHB79909.1 [NCBI]
Genbank nucleotide accession
KF767351 [NCBI]
CDS location
range 32756 -> 34924
strand +
CDS
ATGTCAGAATATAATAAGACAATTCTAACTAATGAGGGTATTGATTTGGCCCGTAGAGCTAACAAGGGTACGGCAACTTTTTCTTTGACGAGAGGTGTTTCATCAACTGATAACTTATCGGAAAAAACAGTTGAAGAGCTTCAAAACTTAACCCAGTTACCAAGTATCCAGCAATCAGTGAAGTTGAGTGATGTAGGAGATACGTCTGATAATTCAGATACTGTTTTAGGTGTTAGAATGACCTTTGATAACCAGAATTTGAAGACTGGTTATAATGTGCATACTGTTGGTATTTATGCAAAAGAACCAGATAAAAATGAAATTCTTTACGGTATAGCTACAGCTAAGACACCTGAATATATCCCAGATTTTAGTGAGCAAACTTTATTTAAGTTTGATTTTTTGATGTATCTAGTAATTGGTAGAACTGATAAGGTAACTGTTGAAGTTAGTCCGGATGATGTTTATCGTAAAAAGGAAGTGTATAGCAAGTCCGAGGTTGATACAGCTGTAGCAAAACTTGATAAAAAAAACGCTGAAATCGTTAAGAGCTTAAGCGATTATAAATTGGAGAACTCTACTTATCACACAAACTTTGAGAAAAGCGTAACTGATAGGCTGGGTACTAAAGCTGATAAAACTACTGTAGAACAGCAACTTGGAACAAAGGCTGATAAATCAAATACTTACACCAAAGATGAAGTGAATAGTAAAGTAGCTCCTAAGGCAGACAAAGGCTATGTAGACAGCGAATTAAACAAGAAAGCCGATAAAGCTACTACTTACACCAAGACAGAAGTTGATAATAAAATCGCTGGTCAGGTTAAGTCGGTAAATGGGCACACTGCTAATGCCAGTGGTGCAGTAACCTTACCAACTTTAACAGCTAATGTGCTTACTGGCTATGATGTAAAGAATAAGGCTGCTACTTTTGATAACAACGCTCATTTTGACGCAAATGGGCTTTTTTCAAGATGGACTGTAGATCAAGGCGTTATCGGACAACTTGCTGATGCAATTAATGCAAAGTTACCCATTGAAGCAGGAGATCCTAATGGAGACTTGTTAGATTATGCTGGTAATAAAATTGTTTACTGGAATGGTAATGGTGACGGGGTTAAGAACTTGCCACCAATGAACAATAAGAAATGGTTCTTTGCAGTCAAACTATTCTATCTGGGTTGGGGTTCAGTTACTGTTGTAGATCAAGACGGTAGTTATTGGTTGAATACTAAGAATGACGATATTTGGACTGGTTGGCGTTCAGTAATCACAAATGAACATCTTAAAAAGTTAAAATTTGTAAAGCAATCATTAGATCAAAACGGTAATATTTTCCAAGATACTAAGTTTGTAACTCAAGAGGCAGACGGAACATATAAGATTAACATTTTTGATAGCGACTGGACTGCTAATAAGGTTTCATGGCTGTTAAATAATACCAAGTCTTACAGCATTCAAAATAATACTGATTTGAATAACGTTAAGAATACGGGGTTCTATAATGCGGCAGGTCCTTCCGGATTAAAAAATTCTCCTGTGTCAGCTTGGTTTAGTATGTCCGTAAATGCCAATCAATGGAACGGCCAACAAACTCTGTATGATACAAATAGTGGTCAATTATATGTGAGAACGTGGAATTCAACTAGATTTACAGATTGGCAAAGAATAGCTAATGCTGGCGACTTAACTAATCAGAGTATTACATCAATTACTGATTATGATGTAGCTTCCGAAGGCTGGCATAACACCCAAGTTGGAAAATTTGATCCATCAGGACACTTTGCTAATTTATTAGTTGATGCTGGAGCTTTGAAGCCGATAGCAGAGGCAATCAATAACCTGAATACCAATTTAACAACTATGCGAACTGAGTTAATGAACTTGAAGAAGAGAACTGATTACAATACTCCTCAAGGAGAGTTCAATAATACCACTGTAAATCTTAATAACTTAAGAAGCACAGGAATGTATCGTCTTTCAAATTGTCATGTTCAAAGTGGACCATATCCAACCGATAATGCGCACTGGGTTTACGTTAAAGTGGCAGTATTTGATGCTAATACTGTTTATCAAACGCTCTATGAAGGCGATAATATGTACGGCAGAAAATCCTCAAGTACCTCAGCTTGGGGACAATGGCATGAATATTTGAATAGACCTATTTAA

Tertiary structure

PDB ID
375e0cd807aa545400cd5b360fed3c2c92a4ae5ef3c824ffeba8f4ed565b6866
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7064
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Spontaneously Induced Prophages in Lactobacillus gasseri Contribute to Horizontal Gene Transfer Baugher,J.L., Durmaz,E. and Klaenhammer,T.R. 2014 24682298 GenBank