Protein

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Genbank accession
YP_009800377.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MDPHVQPWYEAAKTGKNYYSMNEFPGTGSDTFDINFAGGYLDKTHVKAYMVKTGETDIELLALTFLTAARVKTSKPVPIGYKCVIYRDTPKSVPMLSFKDGAPMTAINLDRNAMQSIFSAAEMVDRYESTTATVGEIGGVVVDFDKEIKDMRAIMAKVQGQITSSVFTTATSSTYEIVVGQVATLRVGLTQPTTTLKVTAKDVPGATNRLTLFLRQDRGANKVIWPDNIRWPNFNAPPLSWTQGAEDVFELYTPDSGSTWYGMFSGGWY
Physico‐chemical
properties
protein length:269 AA
molecular weight: 29698,40110 Da
isoelectric point:5,77185
aromaticity:0,11152
hydropathy:-0,22082

Domains

Domains [InterPro]
IPR005604
ATT
22–130
IPR005604
DC_1864
STR
60–269
DC_1864
YP_009800377.1
1 269
Architecture
ATT
STR
ATT 22-130 | STR 131-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiR8-01
[NCBI] 		1206556 Uroviricota > Caudoviricetes > Autographivirales > Melnykvirinae > Pienvirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009800377.1 [NCBI]
Genbank nucleotide accession
NC_047951.1 [NCBI]
CDS location
range 33642 -> 34451
strand +
CDS
ATGGACCCTCATGTACAGCCCTGGTACGAAGCTGCCAAGACTGGAAAGAACTACTATTCGATGAATGAGTTCCCCGGAACTGGTTCAGACACTTTCGATATTAACTTCGCTGGTGGGTATCTCGATAAGACTCACGTCAAAGCCTACATGGTTAAGACTGGTGAGACTGACATTGAGCTACTGGCCCTGACGTTCCTTACCGCTGCCCGTGTCAAAACGAGCAAGCCTGTTCCTATCGGTTACAAGTGCGTAATCTACCGGGACACTCCGAAGTCGGTTCCTATGTTGAGTTTCAAAGATGGCGCTCCAATGACCGCTATCAACCTCGACCGGAACGCCATGCAATCCATCTTCTCGGCTGCTGAAATGGTTGACCGCTATGAGTCAACTACCGCAACCGTTGGTGAGATTGGCGGCGTTGTCGTGGACTTCGACAAAGAGATTAAGGACATGCGTGCAATCATGGCTAAGGTTCAAGGCCAGATTACATCGTCAGTGTTCACAACAGCCACATCCAGTACCTATGAGATTGTCGTAGGTCAAGTAGCTACGTTGCGTGTGGGTTTAACCCAGCCAACTACTACGTTGAAGGTTACAGCTAAAGATGTGCCGGGAGCAACAAACAGACTTACGTTGTTCTTGAGACAGGACCGAGGGGCTAACAAAGTCATCTGGCCTGATAACATCCGTTGGCCTAACTTCAATGCGCCACCTCTGTCATGGACACAGGGCGCTGAGGATGTGTTCGAACTTTATACACCGGATTCAGGTTCAACCTGGTACGGTATGTTCTCTGGAGGTTGGTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7badeaad6acc14157aa7814ef4c3c6fa7817fd8745f771a614a968782f14af87
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8419
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of five bacteriophages specific for Yersinia species Skurnik,M., Nawaz,A., Happonen,L., Butcher,S. and Mattinen,L. 2012 — GenBank