Protein

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Genbank accession

AAD42460.1 [GenBank]

Protein name

gp37 long tail fiber, distal subunit

RBP type

Evidence UniProt/Swiss

Probability 1,00

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,79

Evidence RBPdetect2

Probability 0,89

Protein sequence

MATLKQIQFKRSKIAGTRPAASVLAEGELAINLKDRTIFTKDDSGNIIDLGFAKGGQVDGNVTINGLLRLNGDYVQTGGMTVNGPIGSTDGVTGKIFRSTQGSFYARATNDTSNAHLWFENADGTERGVIYARPQTTTDGEIRLRVRQGTGSTANSEFYFRSINGGEFQANRILASDSLVTKRIAVDTVIHDAKAFGQYDSHSLVNYVYPGTGETNGVNYLRKVRAKSGGTIYHEIVTAQTGLADEVSWWSGDTPVFKLYGIRDDGRMIIRNSLALGTFTTNFPSSDYGNVGVMGDKYLVLGDTVTGLSYKKTGVFDLVGGGYSVASITPDSFRSTRKGIFGRSEDQGATWIMPGTNAALLSVQTQADNNNAGDGQTHIGYNAGGKMNHYFRGTGQMNINTQQGMEINPGILKLVTGSNNVQFYADGTISSIQPIKLDNEIFLTKSNNTAGLKFGAPSQVDGTRTIQWNGGTREGQNKNYVIIKAWGNSFNATGDRSRETVFQVSDSQGYYFYAHRKAPTGDETIGRIEAQFAGDVYAKGIIANGNFRVVGSSALAGNVTMSNGLFVQGGSSITGQVKIGGTANALRIWNAEYGAIFRRSESNFYIIPTNQNEGESGDIHSSLRPVRIGLNDGMVGLGRDSFIVDQNNALTTINSNSRINANFRMQLGQSAYIDAECTDAVRPAGAGSFASQNNEDVRAPFYMNIDRTDASAYVPILKQRYVQGNGCYSLGTLINNGNFRVHYHGGGDNGSTGPQTADFGWEFIKNGDFISPRDLIAGKVRFDRTGNITGGSGNFANLNSTIESLKTDIMSSYPIGAPIPWPSDSVPAGFALMEGQTFDKSAYPKLAVAYPSGVIPDMRGQTIKGKPSGRAVLSAEADGVKAHSHSASASSTDLGTKTTSSFDYGTKGTNSTGGHTHSGSGSTSTNGEHSHYIEAWNGTGVGGNKMSSYAISYRAGGSNTNAAGNHSHTFSFGTSSAGDHSHSVGIGAHTHTVAIGSHGHTITVNSTGNTENTVKNIAFNYIVRLA

Physico‐chemical properties

protein length:	1026 AA
molecular weight:	109223,26670 Da
isoelectric point:	8,53789
aromaticity:	0,08967
hydropathy:	-0,39006

Domains

Domains [InterPro]

DC_0538
STR
1–1024

DC_0538

IPR048390
ATT
486–628

IPR048390 IPR005003 SSF88874

IPR051934
Unmapped
552–1026

IPR051934

IPR037053
ATT
811–864

IPR037053 IPR005003 IPR005003 IPR005003 IPR005003 IPR005003

IPR011083
ATT
816–863

IPR011083

AAD42460.1

1 1026

Architecture

STR

ATT

STR

ATT

STR

STR 1-485 | ATT 486-628 | STR 629-810 | ATT 811-864 | STR 865-1025 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0538	STR	DC_0538	1	1024	Novel HMM	DC_0538	Central	Low	Positional only	380 proteins / 380 hits
IPR048390	ATT	DC_0836	486	628	InterPro cluster	Long-tail fiber proximal subunit, trimerization domain	C-terminal	Medium	Text match	656 proteins / 656 hits
IPR051934	Unmapped	-	552	1026	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
IPR005003	Unmapped	-	737	749	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
SSF88874	STR	SSF88874	805	1025	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	811	864	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	816	863	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR005003	Unmapped	-	878	891	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	910	923	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	924	937	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	961	974	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	975	986	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

AAD42460.1

1 1026

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	218	218	0,2083
Central domain	219	417	200	0,5144
C-terminal	418	1026	608	0,7808

Note: Constraints were applied during segmentation.
Fixed 15 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-218

Central
219-417

C-terminal
418-1026

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage T4 [NCBI]	2681598	Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host	Escherichia coli B [NCBI]	37762	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

1 / 2

PDB ID

Source

Method

Resolution

Oligomeric State

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)