Protein

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Genbank accession
QIG68502.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYSRVTIPGDGVTTQITASFALGYINQSDVKIHVTGEVDGGGNIVYRTYSKISDTLYQVNGTPCPVGEFYVVERIVTKTQLIVDWEDQEPITDANLNLMQKQTMMVAQEAFDLGITSLRTEDGSEGPTIEKGLDGQMVIWQGGNIKAGPNAQDIADAQLNAAAAEASALAAANSASSSATFAGQSSSYRTIAQQWAETAEDVNVPGNPGKFSALHWAAKAAKLVASSFATAITGSTAKATLADADEFGITDSAASFGMKKTLASTVFSYVIGKLGFDFFYDFIPIYVNSTNISVGTGRGYFGGKYHETLSVTTGTLTSFLDTGSVQASKTYFLYAIRQISTGTVGFRASLSSTPGGVTVPGGWECLSGSRIGIILTNASSQVVPFVQKGNRFLTQAVLWFNTSSNLAQLTVAPASSLPVGISVDGLFLVGAQMSTTGQDISAFIADADAANAAVATTPPQMIVARARTGSGDNVDASTTTGIARTDLLGRVYTYCLTSTASAVASYYICGWIDYSCRRISG
Physico‐chemical
properties
protein length:522 AA
molecular weight: 54720,65600 Da
isoelectric point:4,90528
aromaticity:0,09195
hydropathy:0,08774

Domains

Domains [InterPro]
IPR005604
3–124
IPR005604
QIG68502.1
1 522
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM38
[NCBI] 		2509767 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG68502.1 [NCBI]
Genbank nucleotide accession
MN988493.1 [NCBI]
CDS location
range 36026 -> 37594
strand +
CDS
ATGGCTTATTCCCGAGTAACTATACCGGGTGATGGCGTTACAACCCAGATCACAGCGTCTTTTGCGCTGGGCTATATTAACCAGTCTGATGTGAAAATTCATGTAACTGGTGAGGTAGACGGGGGCGGTAACATCGTCTATCGGACTTACTCCAAGATTTCGGACACTCTATACCAAGTAAACGGTACGCCGTGTCCAGTAGGCGAATTTTATGTAGTAGAGCGTATAGTCACCAAGACCCAGCTTATCGTGGATTGGGAAGACCAAGAGCCTATTACCGATGCAAACCTTAATCTGATGCAGAAGCAGACTATGATGGTCGCGCAGGAAGCATTCGATCTAGGTATTACTTCCCTTAGAACGGAAGATGGTTCGGAAGGCCCTACCATTGAGAAGGGTCTAGATGGTCAGATGGTTATCTGGCAAGGCGGCAATATTAAGGCCGGTCCTAATGCACAGGACATTGCAGATGCACAGCTTAATGCAGCCGCAGCAGAAGCATCTGCACTAGCCGCAGCTAACTCTGCAAGCTCTTCTGCTACCTTTGCTGGACAGTCGTCTAGCTATCGTACTATTGCGCAACAGTGGGCTGAGACTGCAGAAGATGTAAACGTACCCGGCAATCCCGGTAAGTTCTCTGCGTTGCATTGGGCTGCTAAGGCTGCTAAGCTTGTAGCATCTAGCTTTGCTACGGCTATTACTGGATCAACTGCTAAAGCTACTCTAGCCGACGCTGACGAGTTTGGTATTACAGATAGTGCAGCTAGTTTCGGTATGAAGAAGACACTGGCAAGTACGGTCTTTAGTTACGTTATTGGTAAACTTGGTTTTGATTTCTTCTACGACTTCATACCAATATACGTCAACTCTACAAACATCTCAGTTGGTACTGGTAGAGGATATTTCGGTGGTAAGTATCACGAAACTCTGTCAGTTACGACCGGAACATTGACGTCATTTCTAGATACCGGTTCTGTACAGGCGAGTAAAACTTACTTCTTGTATGCTATCAGGCAGATATCGACAGGCACTGTAGGTTTCAGAGCATCCTTGTCATCGACTCCGGGCGGTGTTACTGTTCCGGGTGGCTGGGAGTGCTTATCTGGTAGTCGTATTGGTATTATACTAACGAATGCCTCTAGCCAAGTAGTACCTTTTGTACAGAAGGGCAATAGATTTCTTACGCAAGCTGTGTTGTGGTTTAACACGTCGAGCAACTTAGCTCAGTTGACAGTAGCTCCAGCTTCAAGCTTGCCTGTAGGTATTTCCGTAGATGGCTTATTTCTTGTAGGTGCGCAAATGTCTACAACAGGTCAAGACATTAGTGCCTTCATTGCCGACGCCGATGCTGCTAATGCTGCAGTAGCGACTACCCCTCCGCAAATGATTGTTGCAAGAGCAAGAACTGGTAGTGGTGATAACGTAGACGCGTCTACTACTACAGGTATTGCGCGCACCGATCTACTTGGTCGGGTTTATACGTACTGCTTGACTTCTACCGCCAGCGCAGTAGCAAGTTATTATATCTGCGGCTGGATAGACTATTCTTGTAGGAGAATTAGTGGATGA

Tertiary structure

PDB ID
62ad8fb0c65d9d741728a97ab70b34d720adfd97189aa2e61c3740b9cbf906b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank