Protein

View in Explore
Genbank accession
YP_001671930.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MGLEVATYINQLVPTNPTGSDLKSFGDDHLRLIKSAIKNTFPNISQAVTVTAAQLNAVADTTQYVKPGMVIMWAGSLAQIPAGWKLCNGVGTTSNGIPVPNLIGAFPWGIDGSSQAVGTRGGSANIVWDGFTEGTALTLAQIPSHTHTWRSRGATTLTGSAGDSGALTGGSGNAANTNLETGPAGQGQTHNHAVKINMPLGNIPPFCSVFFIIKN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22154,72920 Da
isoelectric point:7,84627
aromaticity:0,06512
hydropathy:-0,00047

Domains

Domains [InterPro]
DC_2164
STR
3–215
DC_2164
SSF88874
STR
60–214
SSF88874
YP_001671930.1
1 215
Architecture
STR
STR 3-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LUZ24
[NCBI] 		484895 Uroviricota > Caudoviricetes > Bruynoghevirus >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001671930.1 [NCBI]
Genbank nucleotide accession
NC_010325 [NCBI]
CDS location
range 35846 -> 36493
strand -
CDS
ATGGGTCTTGAGGTCGCAACTTACATTAACCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAATCCTTTGGGGATGACCACCTGCGTCTCATTAAGAGTGCTATTAAGAACACCTTCCCCAATATTTCTCAGGCTGTCACTGTAACGGCAGCCCAGCTAAACGCAGTCGCTGATACAACCCAGTATGTTAAACCTGGGATGGTTATCATGTGGGCTGGGTCACTAGCTCAGATCCCAGCAGGTTGGAAGTTGTGCAATGGGGTAGGTACTACCTCTAACGGGATTCCCGTCCCTAACCTGATTGGTGCATTCCCTTGGGGTATCGATGGTTCTTCCCAGGCTGTAGGGACTAGAGGTGGTAGCGCTAACATCGTATGGGATGGGTTCACTGAAGGGACTGCCCTTACCCTAGCCCAAATCCCATCGCACACCCACACTTGGAGATCCCGAGGGGCTACTACCCTCACCGGTTCTGCGGGTGACTCTGGTGCTCTGACGGGTGGCTCTGGTAACGCAGCCAATACCAACCTTGAGACTGGCCCTGCTGGTCAAGGTCAGACTCACAACCATGCAGTAAAGATCAACATGCCGTTGGGTAATATCCCACCGTTCTGTTCTGTGTTCTTCATCATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4785632fcbd8c89dbbc56448c7c9cf341375d1e9ecb60c567d84dfefca368de7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7414
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of the genome, proteome and transcriptome of Pseudomonas aeruginosa phage LUZ24 Ceyssens,P.J., Demeke,M., Lavigne,R., Ackermann,H.W., Noben,J.P., Volckaert,G. and Hertveldt,K. 2015-11-06 — GenBank