Protein

View in Explore
Genbank accession
BCD83106.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAKRLVKNSVVLAAVGATPTASNVVDISDPFSPSFTTKTGEYKQYDGQMGTTKTWVDGNYLVASGTISAFLKSNGGGANVPKLDELFKMAGLTGQAVDTDGDGANDAYVYSPNSDELATGEVVWYLDGIKRHFTGVSANLKLDLEVGAPAKAQFDIQGYSDTPVEEPNPSVTLDNNDIFVVTSAQAVTLGGNTLPVTSVSFDMGNQINEIYAIGDKSFYRSDFAAKVSITEKVGNDIGYWGEFLSGAIKSLEVTLSDRSGNKFVLHLPTLSYTNISESGTDELEATREFLASNDFTITYL
Physico‐chemical
properties
protein length:300 AA
molecular weight: 32048,15660 Da
isoelectric point:4,40504
aromaticity:0,09667
hydropathy:-0,16233

Domains

Domains [InterPro]
IPR044000
37–234
IPR044000
BCD83106.1
1 300
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Nitratiruptor phage NrS-2
[NCBI] 		2725864 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BCD83106.1 [NCBI]
Genbank nucleotide accession
LC545443 [NCBI]
CDS location
range 28712 -> 29614
strand +
CDS
ATGGCAAAAAGACTCGTAAAGAACAGCGTTGTATTAGCTGCGGTCGGCGCAACGCCTACAGCATCAAATGTTGTGGATATCAGCGATCCATTTAGCCCAAGTTTTACTACAAAAACGGGTGAGTATAAGCAGTATGACGGGCAGATGGGGACCACTAAGACTTGGGTGGATGGCAACTACTTGGTGGCAAGTGGGACAATTAGTGCGTTTCTCAAGAGCAATGGTGGTGGGGCAAATGTGCCAAAACTCGATGAATTGTTCAAAATGGCAGGACTCACCGGTCAAGCAGTTGATACGGATGGTGACGGTGCAAACGATGCATATGTATATAGTCCTAATTCTGATGAATTGGCCACAGGTGAGGTAGTTTGGTATCTCGATGGCATCAAACGGCACTTTACAGGTGTGAGTGCTAATTTGAAACTCGATCTTGAAGTTGGAGCACCTGCAAAAGCACAATTTGATATCCAAGGGTACAGCGATACTCCGGTTGAAGAGCCAAATCCATCTGTAACGTTAGACAATAATGACATTTTCGTTGTTACTTCTGCTCAGGCCGTGACTCTAGGTGGTAATACATTGCCAGTTACAAGCGTTAGTTTTGATATGGGCAACCAAATCAACGAGATATATGCAATTGGTGATAAGAGCTTTTATCGATCCGATTTTGCAGCAAAAGTATCCATCACAGAAAAAGTCGGAAACGATATCGGATATTGGGGCGAGTTTTTAAGTGGCGCAATCAAGTCTCTTGAAGTGACCTTGAGCGATAGAAGTGGCAATAAGTTTGTGTTGCATCTACCAACGCTTAGCTATACAAATATCAGTGAAAGTGGAACGGATGAACTTGAAGCCACAAGAGAGTTTTTGGCAAGCAACGATTTTACGATTACATATCTATAA

Tertiary structure

PDB ID
caf7fe98dced8c62ba1008c28e5c8b8625d207afc48a366e52b0e548cc7c8649
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9478
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic insights into the co-evolution between the temperate phages and deep-sea chemolithoautotrophic Epsilonbacteraeota, Nitratiruptor Yoshida-Takashima,Y., Takaki,Y., Yoshida,M., Nunoura,T. and Takai,K. 2022-11-01 — GenBank