Protein

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Genbank accession
XCO39521.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSTVITYPLNDSRQYHIPFDYLSRKFVEVRLKKQDGEVGPLLVNLQHYRFGDKTTIVLFSDVNTGGYDSVEIRRNTSATERVVDFSDGTILRASDLNASQIQAIHIVEEVRGQTISDMTELSELTKMYRDQALTYRNESSAFSESAEAAKDATIEAIQKAGDRSTLAYLALPEGADAIGIKEGGKLSDVIDEYTLDALGMVDFADATAKLEQVVAWQALTGYKIRQSVPRRYTLSGNKKYYFSHGVNLSGVTWVPDASFKGVVGYKGPDELKVYDSSTPEGAALLAKINSSTSKSKSAQSAILDGLIGDSTLNGCYVQLKGPDVLFTARGNPKTWVHTTRVSRDGQMDHAMKYSFSSITSVRALPIRTSGGYTKVNLGVIDMRNSPHNGAGMLEVLNGSRIEVEGMGVINKPIVDTASNVLIKLDTGWNVRVKDYYDQWPNDSWSSGVRVYSYGLNFNNMVGLHVVNFDSQGAGWGTTAGADCTDTTFEGCNLNRVDFHSPFWGYLRVIRCHLGNHAFSVCGCGDRLSIKDCKVTFHPGGVDNGILKGRDDQGGFMDCDLEIDGLVIDGELDADLGMLRSGDDGTGGVPAGSPVTPRFFRNVSIRNVRWQARKETARFANLIRASRDGSVWFPESVTLENFDFNSGDDDGSALTIGFTNFKQKRDFDNTANPLTVPFTTHIKMTDVSASRVLIRGAGVSHNPRVVIENLRDLRAGKMGSTLEITQRGSYKVSDSQIKKLYLSSTFTGMASPNGYCDVDLVNTDLVNPTESPIGNIQDLHSISMTGGNLMAPFGGTSDTSIARAIARAMTLRGVTLRGPDGAQLANAPLWSGSIGSTETPIDGDLQVRWGNRLSVTSYIDSTPNVASLFVEGTTAWHTLFARSAANTSPIRLDLRARTGRSLFNSVIGTPEGVRTINITGG
Physico‐chemical
properties
protein length:921 AA
molecular weight: 100083,09430 Da
isoelectric point:6,03007
aromaticity:0,08035
hydropathy:-0,27220

Domains

Domains [InterPro]
DC_1510
STR
1–483
DC_1510 DC_1183
IPR005604
ATT
5–119
IPR005604
XCO39521.1
1 921
Architecture
ATT
STR
RBD
ATT 1-119 | STR 120-483 | RBD 611-918 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39521.1
1 921
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9146
Central domain 233 850 619 0,9823
C-terminal 851 921 70 0,8932
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-850
C-terminal
851-921

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146030
[NCBI] 		3232210 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39521.1 [NCBI]
Genbank nucleotide accession
PP889480.1 [NCBI]
CDS location
range 34811 -> 37576
strand +
CDS
ATGTCCAGCACAGTTATTACCTATCCACTGAACGACTCTAGACAGTATCACATACCTTTCGACTACCTATCTAGAAAGTTCGTCGAAGTACGGCTTAAGAAACAGGATGGAGAGGTTGGGCCTCTTCTCGTCAATCTTCAGCATTACCGATTTGGAGACAAGACCACCATCGTACTTTTCTCTGATGTGAACACTGGAGGCTATGATAGTGTTGAGATTCGCAGAAACACATCCGCAACCGAGCGTGTGGTGGACTTCTCTGATGGTACGATACTGCGGGCGTCTGATTTGAACGCATCCCAGATACAGGCTATCCACATAGTCGAGGAGGTTAGGGGTCAAACAATATCAGACATGACTGAGCTTTCGGAGCTTACAAAGATGTACCGAGACCAGGCTTTAACGTACCGCAACGAGTCCTCAGCGTTCTCTGAGAGTGCGGAGGCGGCTAAAGACGCCACCATAGAGGCGATACAGAAGGCTGGTGACAGGTCGACGCTTGCCTATTTAGCACTCCCTGAGGGAGCCGATGCTATCGGTATTAAAGAGGGAGGAAAGTTATCCGATGTCATTGATGAGTACACTCTTGATGCACTAGGTATGGTCGACTTTGCAGACGCTACAGCAAAGTTAGAGCAGGTCGTGGCATGGCAGGCGCTTACTGGATATAAGATACGCCAGTCGGTACCTCGCCGATACACCCTAAGTGGGAACAAGAAGTATTACTTCTCACACGGCGTGAACCTTTCAGGGGTAACTTGGGTACCAGACGCATCCTTTAAGGGAGTTGTCGGGTATAAAGGACCAGACGAGCTTAAGGTTTACGACTCGTCCACACCTGAAGGGGCAGCATTACTTGCCAAGATAAACTCGTCCACATCCAAATCAAAGTCGGCACAATCGGCGATACTGGATGGACTCATTGGGGATTCGACACTAAACGGGTGCTATGTGCAGCTCAAAGGTCCAGACGTGCTGTTCACCGCAAGGGGAAACCCAAAGACTTGGGTGCACACCACACGAGTGTCAAGAGACGGGCAGATGGACCACGCCATGAAGTACAGCTTCAGCTCCATCACTTCAGTTCGAGCCCTCCCGATTAGAACCTCAGGTGGCTACACAAAGGTTAACTTAGGGGTCATTGATATGCGAAACTCCCCACACAATGGGGCTGGAATGCTGGAGGTTCTGAATGGTTCGCGTATCGAGGTCGAGGGTATGGGTGTGATAAACAAGCCCATCGTAGACACTGCATCTAACGTCCTCATAAAGTTGGACACAGGGTGGAACGTTCGCGTCAAGGATTATTATGACCAATGGCCTAACGATTCGTGGTCATCCGGCGTCCGAGTGTATAGCTACGGACTCAACTTCAACAATATGGTTGGACTTCACGTCGTCAATTTCGACTCTCAGGGGGCAGGATGGGGAACCACCGCAGGTGCAGACTGCACTGACACCACCTTCGAGGGCTGCAACCTTAACAGGGTAGACTTCCACTCCCCGTTCTGGGGGTACTTACGGGTAATCAGATGCCATCTTGGGAACCATGCATTCTCTGTATGTGGGTGTGGCGACAGACTCAGTATCAAGGACTGTAAGGTCACCTTCCATCCGGGAGGCGTAGATAACGGAATCCTGAAGGGCCGAGACGACCAAGGCGGTTTCATGGACTGTGACTTGGAGATTGATGGACTTGTAATTGATGGGGAACTTGATGCTGACTTAGGAATGCTCAGAAGTGGCGATGATGGTACAGGTGGCGTGCCAGCAGGCTCACCAGTTACGCCAAGATTCTTTAGGAACGTAAGTATCCGCAACGTAAGATGGCAGGCAAGGAAGGAGACAGCTAGATTCGCCAACCTTATACGCGCGTCAAGAGATGGTTCGGTTTGGTTCCCGGAGTCTGTGACTTTGGAGAACTTCGATTTTAACAGTGGGGATGATGATGGTTCAGCATTGACCATCGGATTCACAAACTTTAAACAGAAGAGGGACTTCGACAATACCGCCAACCCGCTCACAGTACCATTTACCACCCACATTAAGATGACGGACGTATCAGCTTCTCGCGTCCTGATTCGAGGGGCTGGTGTTTCTCACAACCCTAGGGTGGTAATAGAGAATCTCCGCGATTTGCGCGCTGGTAAGATGGGGAGTACGCTAGAGATAACCCAGCGTGGGTCCTACAAGGTGTCCGACTCTCAAATCAAGAAACTGTACCTGTCGTCAACCTTTACTGGAATGGCTTCACCAAACGGGTACTGTGACGTTGATTTGGTCAATACCGACCTTGTAAACCCAACAGAGTCCCCAATCGGAAACATTCAGGACCTGCACAGCATCTCGATGACTGGCGGGAACCTCATGGCTCCATTTGGTGGAACTTCTGACACGTCAATTGCTAGGGCTATAGCTAGGGCTATGACTCTTCGCGGCGTAACGCTACGGGGACCTGACGGCGCGCAGCTTGCCAATGCACCACTTTGGAGCGGCTCTATAGGGTCCACAGAGACTCCTATTGATGGGGACCTTCAGGTGAGATGGGGGAATAGACTGTCGGTTACCAGTTATATAGACTCCACTCCCAACGTGGCTTCCCTTTTCGTTGAGGGGACAACGGCGTGGCACACCCTCTTTGCAAGGAGCGCCGCAAATACGTCGCCAATCCGTTTGGACCTTAGGGCGAGAACCGGGAGGAGCTTATTCAACTCCGTAATCGGGACACCTGAGGGAGTTCGTACCATAAACATTACAGGAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3cb2c2388ece6003a5fc030582d8da182fefcd2051740b9611dc502e93530cef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank