Protein

View in Explore
Genbank accession
YP_010674194.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,69
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MISYNNSAPNAVNNVGQFGATEGSIGAYKSAAEYASDSKYWAMLSQKNYNNIGEILKEVERLYAEGNLLKEDIEQLKSDFENQNQILLGLIQQTGEAIDNTNTAIGEANAATDRANQAVQDVLAQLDKISNMSVVATTLPPGTPATGSFDNSTGVFSFGIPEGQPGKDGKDGTDGTISDIGDVAISTPVSDDYGFFVDKDDGGLYRTPMSEIAKLVPAVTSFNGRTGPVVPAAGDYTVSQVTGAAASGVNNDINQIRGLTTALSVAQGGTGAKNADDARTNLSAMLDSKTGLDGTTNLNDLNGLKAGFYYQPASANAKPELNYPTQLAGSLVVVKTGAGTGYSCKQVYSLYNNPNVTYSRVLNASAGPTSPWSEWVRHVALSRVEEGSSATYMYSSYAPDAPRLQVWTSGLWGCHNGTNWVPLSLAQGGTGATSAAGARAILNLDRFVATASETQMLSSSGDKKVFINSNNNTWGCYDITNSRFIPLGINQGGTGATTADAARMSLVAAKSGANSDITSMTNVVNFTQSPTIPDAVSSNEPVALGQLSTETAALDTKITEAKDAAAAANTNANSRVLTSQLSDTSEVAQGDALVGVMAPFTGATARTQHDKNLDVISIADFGGGTNWSDNGPALQRAITYAASASGNNRGMVYIPPGVWNFTSGVTVPGNVSIKGAGVGSTQLKINSANLVLFDVGNGTNNPNNVSISDLHVLVSSTCTANPLFRFRNGYNCGIDNIRVDGPWYDLIHFRGGAAQFVYRVSDSILNGTSASRHTITIGESSSDGVVQDVFLTNLVLGGRTTGYGVYEKYSSGVYATNVDSLNVNVGWAWEPATGCYCKGSFYTAILGDTNSTAGLRIRPQAGTTVNDLTFNGCWVSSAGSNSSHHGLIIDSSAGTVANISFNGLTAVNNKGHGVYINGSTTGYGYEFTNLSVSNNSQAGASLCSGMKIVAGSSHINISNGHAGGTLGLGTNNQAYGIDVEAGTGNSIKIVNMEMHNNKLGAMNFGATGPYNRIEGCSPFRTRMKGAVELKNGTSSITVNPGLNRPFGGADVQVTPTTDLGALRYWVTQSGNSFTINTNANVSGGQWFSWAVDASYS
Physico‐chemical
properties
protein length:1096 AA
molecular weight: 114213,59120 Da
isoelectric point:5,08643
aromaticity:0,07755
hydropathy:-0,20620

Domains

Domains [InterPro]
Coil
Unmapped
59–79
Coil DC_1909 DC_1082 DC_2130
cd19958
STR
289–377
cd19958 DC_1093 IPR012334
IPR011050
STR
614–959
IPR011050
YP_010674194.1
1 1096
Architecture
STR
ATT
STR
RBD
STR 221-541 | ATT 568-624 | STR 625-1037 | RBD 1038-1094 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010674194.1
1 1096
Domain Start End Length (AA) Confidence
N-terminal 1 621 621 0,9328
Central domain 622 1020 400 0,9890
C-terminal 1021 1096 75 0,9867
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-621
Central
622-1020
C-terminal
1021-1096

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_WFI101126
[NCBI] 		2508203 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010674194.1 [NCBI]
Genbank nucleotide accession
NC_070991.1 [NCBI]
CDS location
range 9852 -> 13142
strand +
CDS
ATGATCAGTTACAACAACTCAGCACCTAATGCAGTTAATAACGTAGGTCAGTTTGGTGCTACAGAAGGCTCTATCGGTGCTTACAAATCAGCAGCTGAATATGCATCTGATTCCAAGTATTGGGCGATGCTTTCTCAAAAGAACTATAACAACATTGGTGAGATTCTTAAAGAAGTAGAAAGACTTTATGCAGAAGGTAATTTATTAAAAGAAGATATTGAACAACTCAAATCTGATTTTGAAAACCAAAACCAAATACTTCTCGGACTCATTCAGCAAACCGGTGAAGCCATTGACAACACTAATACTGCTATTGGCGAAGCTAATGCAGCAACAGATCGAGCTAACCAAGCAGTGCAAGATGTTCTTGCTCAATTAGATAAGATTTCTAACATGTCTGTTGTTGCTACAACCCTTCCTCCGGGAACCCCTGCAACTGGGAGTTTTGATAACAGTACAGGTGTTTTCTCTTTTGGTATCCCCGAAGGACAACCCGGTAAAGACGGCAAAGATGGAACGGACGGTACAATCTCTGATATTGGGGATGTTGCCATAAGCACCCCTGTGTCTGATGATTACGGATTCTTTGTGGATAAAGATGATGGTGGTTTGTATCGAACTCCGATGAGTGAGATCGCTAAGTTAGTTCCGGCAGTGACCAGTTTCAATGGTCGTACTGGTCCTGTTGTTCCAGCTGCTGGAGACTACACAGTAAGTCAAGTTACTGGCGCAGCTGCTTCTGGTGTTAACAACGATATTAACCAGATTCGCGGGTTAACCACTGCCTTATCTGTAGCTCAGGGTGGTACAGGTGCTAAGAATGCAGATGACGCTAGAACTAACCTATCTGCAATGCTTGACTCTAAAACAGGGCTTGACGGAACAACAAATCTCAATGACTTAAATGGATTAAAAGCTGGGTTTTATTACCAACCTGCTTCTGCTAATGCAAAACCAGAACTTAACTACCCTACACAACTGGCAGGTTCTTTAGTAGTAGTCAAGACAGGTGCAGGTACAGGATATTCATGTAAGCAGGTTTATAGTTTATACAACAACCCTAACGTAACCTACTCTCGTGTACTTAACGCCAGTGCAGGCCCAACCTCTCCTTGGTCTGAATGGGTAAGACATGTGGCCCTAAGTAGAGTAGAAGAGGGATCTTCCGCTACTTACATGTACTCCTCTTACGCTCCGGATGCTCCTAGACTTCAGGTTTGGACTAGTGGTTTGTGGGGGTGTCATAACGGTACTAACTGGGTTCCTTTGTCCTTAGCTCAAGGTGGCACTGGAGCAACATCAGCAGCTGGTGCTCGAGCTATTTTAAACTTGGATAGGTTTGTAGCAACAGCATCAGAAACTCAGATGCTCTCCTCTTCTGGAGACAAGAAGGTTTTCATTAACAGTAATAATAACACATGGGGATGTTATGACATTACCAACTCTCGCTTTATCCCACTAGGGATCAATCAGGGAGGTACTGGAGCAACCACTGCTGATGCAGCTCGTATGTCTCTTGTTGCTGCTAAGAGTGGTGCTAACTCTGACATAACCTCTATGACTAATGTGGTTAATTTCACTCAGTCTCCAACAATCCCCGATGCAGTGTCTTCTAATGAGCCTGTTGCTCTTGGGCAACTTTCCACAGAAACTGCCGCTTTGGATACGAAGATAACAGAAGCTAAGGATGCTGCTGCTGCTGCTAACACTAATGCTAATAGCAGAGTTCTCACTTCACAACTATCAGATACATCTGAAGTTGCTCAAGGGGACGCTTTAGTGGGGGTTATGGCTCCTTTTACTGGTGCTACTGCTCGTACTCAGCATGATAAAAACCTTGATGTGATCTCTATAGCTGACTTTGGTGGTGGTACAAACTGGTCAGATAACGGTCCAGCTCTTCAGAGAGCAATCACATATGCAGCTTCTGCATCTGGTAACAACCGTGGTATGGTTTATATCCCTCCGGGAGTGTGGAATTTCACTTCTGGCGTAACTGTTCCGGGTAACGTTTCTATTAAAGGGGCTGGGGTTGGTTCAACCCAATTAAAAATAAATTCTGCTAACTTAGTTTTATTTGATGTTGGTAACGGAACCAATAACCCGAACAACGTCAGTATCTCTGATTTACATGTTCTTGTAAGTTCCACTTGCACAGCAAACCCTTTATTCCGTTTTAGAAATGGATATAATTGTGGTATTGATAACATCCGTGTTGATGGGCCTTGGTATGACCTTATCCACTTCCGTGGTGGTGCTGCTCAGTTCGTCTACCGAGTCTCGGATAGTATCCTAAACGGTACTTCAGCTAGCCGTCATACGATTACCATTGGTGAATCTTCATCAGACGGTGTTGTTCAAGATGTTTTCTTAACAAACTTAGTCCTTGGTGGAAGAACTACCGGATACGGTGTTTATGAAAAATACTCTTCTGGAGTTTATGCGACTAATGTTGATTCTCTCAACGTTAACGTAGGTTGGGCTTGGGAACCTGCTACTGGATGTTACTGTAAAGGAAGTTTCTACACTGCAATTCTTGGTGATACTAACTCTACAGCTGGTCTTAGAATTAGACCTCAGGCTGGTACAACAGTTAATGACTTAACTTTCAATGGATGTTGGGTAAGTTCCGCTGGGTCTAACAGTTCTCATCATGGTTTGATCATTGATAGTTCTGCTGGTACTGTAGCAAACATTAGCTTTAATGGTTTAACTGCTGTGAACAACAAAGGTCATGGTGTCTACATTAATGGATCTACTACTGGATACGGTTATGAGTTCACAAACCTTAGTGTCTCTAATAACAGTCAAGCTGGTGCTTCTCTGTGTAGTGGTATGAAAATTGTAGCCGGTTCTTCTCACATAAACATTTCTAATGGTCATGCGGGTGGTACTCTTGGTTTAGGTACAAACAACCAAGCCTATGGTATTGACGTTGAGGCTGGTACTGGCAACTCTATTAAAATTGTAAACATGGAGATGCACAATAACAAGCTCGGGGCTATGAATTTTGGGGCAACCGGTCCTTACAACAGGATTGAAGGGTGTTCACCTTTTAGAACCAGGATGAAAGGGGCAGTAGAGCTTAAAAATGGTACATCCTCTATTACAGTAAACCCAGGTTTGAACAGACCATTTGGTGGTGCTGATGTTCAGGTTACTCCTACTACAGATCTAGGCGCTTTGCGTTATTGGGTTACTCAGAGTGGTAACAGCTTTACTATCAACACCAACGCTAATGTCAGTGGGGGTCAATGGTTCTCTTGGGCTGTTGATGCATCTTATAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d9ea39216968b8a2e9de52b223f51bab8d52de77481d56c2cba471c6212140e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7216
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank