Protein

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Genbank accession
AWK24035.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERRPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTILNSGNDPYFVTSVGQTSLQTASIAGLTYILNTEMAPNTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSSGVDYTGDYTAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSGAGDTYAVVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFNYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQDGVFTVPSVLRPVGWADNYREELILTYLPSNPMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLATITVPCRTNADTTEVSLFTDGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 86067,36790 Da
isoelectric point:5,14998
aromaticity:0,08651
hydropathy:-0,25954

Domains

Domains [InterPro]
IPR058003
TTP
4–786
IPR058003
AWK24035.1
1 786
Architecture
TTP
TTP 4-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWK24035.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9911
Central domain 147 345 200 0,1119
C-terminal 346 786 440 0,1032
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-345
C-terminal
346-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phiKpS2
[NCBI] 		1897515 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWK24035.1 [NCBI]
Genbank nucleotide accession
KX587949 [NCBI]
CDS location
range 26067 -> 28427
strand +
CDS
ATGGCCCAGTCCCTAGAGGGTACCATTCAGAGCCTGCTGCAGGGCGTCTCCCAGCAGGTTCCAAGAGAGCGCCGGCCCGGGCAACTGGGGGCGCAGCTGAATATGCTCAGCGACCCAGTTTCCGGTATCCGCCGTAGACCGCCTGGTGAGATTGTCTGGGAAAGCACAATCGATAACCCTGGGCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACTGACGGTAGGCACCTGCTGATTAACACCAGCAATGGTAACTGGTGGTTGCTGGCTAAGAATGGAAAGACCATCCTTAATTCCGGCAATGACCCGTACTTTGTTACCTCCGTAGGCCAGACCTCTTTGCAGACCGCAAGTATTGCTGGATTGACTTATATCCTGAATACTGAGATGGCCCCGAACACAACCGTGGACAACACTGGGCGTATTGACCCCAGCACCACTGGGTTCTTCTACGTTAAGTCTGCAGCATTCCAGAAACGCTGGAACGTAACCGTCACCTCTTCTGGGGTGGACTACACTGGGGACTACACCGCACCGGCTGCCGGTAGCACCAGCGGCAATGCTGAGGAGGTATCAGGTGCCTACGTTGCCCAGCAGCTGCGGGACTCCCTTGTAGCGAATGGGTTGCCAGCTGGGAACGTGAGCGTACGTGGTGCGTATCTGTTCTTCTACGGGTTGAGTAACTGCGTGGTATCCTCTGGCGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTACCTGCACAGCTCCCAGCGCAAGCTGACGGGGCGATGTGCCGTGTAGGGACAGCCTCGTCCGAGACAGCGTGGTACCAGTTCAACTACAGCACTCGTACCTGGTCTGAGGTGGGGGCGTACGGCAGCATTACCAAGATTACGAACATGCCCCGAGAGCTCGCTGCAGATGACAACATAATTGCGCGGGATTGGGAGGGACGCTTAGCTGGCAACGACGATAACAACAGTAATCCCGGATTCGTCGAGAATGGTTACATCACAGGAATCGCAGCTTTCCAGGGGCGCCTGGTTCTGCTTAGTGGTAGCTCCGTGGATATGTCCGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCTACTGTGACGTCACTGCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCTGCCCAGGATTCTGTGTACCGCACCGCTGTGCAGTTCAACCGGGACTTGGTCCTGTTTGCTAACAGCATGCAGGCGGTTGTGCCGGGTTCGGCAGTACTTACGCCAACTAACGCAAGCATTAGCATTACCAGCACCTACGATTGTGACAGCCGTGTTACCCCGGTAATGGCGGGTCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCGGGTATACTGGAGCTAATCCCGTCACCTTACACCGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCCCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGGGAGCGTAATAGCCTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAGTGGTCGTTCCCGTATCCAATCCTAAGCGTACAGGCGCTGGAGGACGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCAAGCAACAAGCTCCTGATTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTGGGCTCAGAATACCGAGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTGCAGGACGGGGTGTTCACTGTTCCGTCGGTATTGCGCCCGGTTGGGTGGGCGGACAACTACAGGGAAGAGCTTATCCTAACGTACTTACCCAGCAACCCTATGGGGCCTACTGAGGTTGGCATCAAGGAGATTGCCGGGGAGAACACCCTACGGGTTGTGCGCGGCGTACCTGATGGTACCTACGTAATCGGCCGACGTTACCGCAGTACGTTTACGCTAACTACGCCTATTCTGCGGGACCAGAATGACAAGCTCGTGGGAAGTGGGCATGTGCGCCTGCTGCGCCTGGACGTGGCAGTACGTAACTCCGGGCACTTCGACGTACAGGTACTAGACACCCCGCGGGACGTCAATTGGGGTGGGGAGCTAACTGGTATCCTGATGAACTCAAAGGAACTGACGCTTGGGCAGGCCCTGCGTATGGACCTGGCTACGATTACCGTGCCATGTCGTACCAACGCAGACACAACCGAGGTGTCACTATTTACTGACGGTTCTATGGAACTGAACGTGTTGGATATATCGTACATCCTGCGCTACAACCAACGCAGACGGAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f44efa3d297cbaf678ac09abb45ae6e3f81e63b990a05bbdbc2b1bd5ac95a534
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8839
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Klebsiella pneumoniae bacteriophage and its effect on 1,3-propanediol fermentation Shen,J., Zhou,J., Xiu,Z., Mu,Y., Fu,H., Sun,Y. and Xu,Y. 2016-10 — GenBank