Protein

View in Explore
UniProt accession
Q6WHC1 [UniProt]
Protein name
Long tail fiber proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,54
TF
Evidence RBPdetect2
Probability 0,50
Protein sequence
MSEFRRAFRASGLDASGQNVINVANPRVDELLDGINQGYFIDENTVQEYDPSRAHYKVDFIVEFNQRLYKNIIEITAPEPFDPQKWKKMRTDPEWEDTDSSVGANVGDLLWLTASSAITITLPETPLTGDTVTIKDGRGILSTYPCTIAAAGGLTIQSYGINGGIQSDASLSFNRPNSTIYLVYNGIAWTYQIEQQLYHTYLDDSHPSQQGGYLTTGGYFTNVGETVTYEGSVKTIAISLPLHPNVGDTIHLKDVAYLESQTTIQIGVRPTAVGQVVQDPVSGDRSAVISLDTIGGADITFIDDNGTGVWVITIANNPHLWNYVGESSAVTLKPRTRYAIEIADAVSAMTITLPEKPVDGDWIEISHNKTAHKPVTVQVHPNFGDDDPGHGPDEYKVFLDFETYRYQKYRHYVDFVPFFVESFDISDYDSGYSFVLYYDGTRKVWSFGNIATRIDIADELHRKRPGIVPLADPTEALAHGIEYAHPEDVAKPWADQSPLKDHVITVETLDARRAAEDQVGMARIATLGVDEALEESRSGALVRYPDSAFRHDIMITPRSLNARTATETRRGVVEIATQTETRSTTNDVQVITPKKFHAAQAEENLTGVAELVKASNNINANGTVASTANMRSDRTVNGVVDTVYDKTDHLRIVTPKMLDEYRATENQPGTLWVAKSTELRVNDSTVDDAIITPKKLAAWKASSTIRGIARSATQAETNAISGTGEAWTTVFVTPETLNSRTATESRRGVAEIATQVEVDAGTDDTRIVTPLKVATWLAYDHFTSDGVAQGAGYGVSGISHTGDIWNGINLEIALATTTQRGTLETATETEAKVQQTWNGTSWDGTAAAADKIVTPLTLDRRRATETQYGLARRATNAEIDTATIGGVDNTPVYVSPKDLLRWTRTSTNSRSDETRFGVVRLATPAETFVGNSTDGSTQAYTAYLRTPYAVTPYSLNYALRNYLPLNAKADDSELLDGLDSTQFARRDINQTINGTYTFNAKNVEINAGGWLQVQNAPTGDIVKLDWFDSAPRIRVGGSGASSTATFSIQGAADFVRWQVNSSGYTTQASGATFGSTVTENESSANVDATYGTYSSPAAGTLRQKYLGINNVAKAAEKWVTARTVTFTGDLTGNFTIDGSGNVSTNVQVNDNSHNHSGENITSGTISNDRLIKSSRTNPGIVQVTSDVRTADPVNASDPHQALSAGAGKTLSERIDLFTPDGGTGDNVKYRDYIQVGSVRMSTNNQGVLEFTFGHAI
Physico‐chemical
properties
protein length:1256 AA
molecular weight: 136598,11460 Da
isoelectric point:4,96826
aromaticity:0,08201
hydropathy:-0,38145

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage KVP40 (isolate Vibrio parahaemolyticus/Japan/Matsuzaki/1991)
[NCBI] 		75320 Uroviricota > Caudoviricetes > Pantevenvirales > Schizotequatrovirus > Schizotequatrovirus KVP40
Host Vibrio
[NCBI] 		662 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAQ64452.1 [NCBI]
Genbank nucleotide accession
AY283928 [NCBI]
CDS location
range 241025 -> 244795
strand -
CDS
ATGTCGGAATTCCGCAGAGCATTTCGTGCGTCAGGTCTTGATGCAAGTGGTCAAAATGTAATTAACGTAGCAAACCCACGAGTAGATGAATTGCTCGACGGTATTAACCAAGGCTACTTCATTGATGAAAACACTGTTCAAGAGTATGATCCATCACGAGCGCACTACAAAGTAGATTTCATCGTTGAATTTAACCAACGTCTCTACAAAAACATCATTGAAATCACCGCGCCCGAACCATTTGACCCACAGAAGTGGAAGAAGATGCGTACCGACCCAGAGTGGGAAGATACAGATTCTTCAGTTGGTGCAAACGTAGGTGACTTATTATGGTTGACAGCTAGTTCAGCAATTACAATTACACTACCAGAAACGCCATTAACCGGCGATACTGTTACAATCAAAGATGGGCGCGGTATTCTATCGACTTACCCATGTACGATTGCAGCAGCAGGCGGTCTAACTATTCAGTCGTATGGCATTAATGGCGGAATTCAATCTGATGCAAGTCTATCATTCAATCGCCCGAACAGTACAATTTATCTTGTGTACAACGGGATTGCATGGACGTATCAAATTGAACAGCAACTATACCACACGTACCTAGATGACAGCCATCCAAGTCAACAAGGTGGCTATCTAACTACTGGTGGTTACTTTACGAACGTAGGTGAAACTGTCACATACGAAGGTTCAGTAAAAACAATCGCGATCTCTCTACCGCTACACCCGAACGTGGGCGATACAATTCATCTTAAAGATGTTGCATATCTTGAAAGTCAAACGACAATTCAAATCGGCGTTCGACCAACAGCAGTAGGTCAGGTTGTTCAAGACCCTGTTTCAGGTGATCGCAGTGCAGTAATCAGCTTAGACACAATAGGTGGAGCTGACATCACGTTTATTGATGACAACGGCACTGGCGTTTGGGTTATCACTATTGCGAACAACCCGCATTTGTGGAACTATGTGGGTGAATCAAGTGCAGTTACGCTAAAACCACGTACTCGTTACGCGATTGAAATCGCTGATGCAGTTAGTGCAATGACAATCACGCTACCAGAAAAACCAGTTGATGGTGACTGGATCGAGATTTCACACAACAAGACTGCGCACAAACCTGTAACAGTTCAAGTTCACCCGAATTTTGGTGATGATGACCCAGGTCACGGCCCAGATGAATACAAAGTATTCTTGGACTTCGAGACTTACCGTTATCAAAAATATCGTCATTACGTCGATTTCGTTCCATTCTTCGTAGAATCGTTCGATATTAGCGACTATGACAGCGGTTACTCATTCGTACTGTACTATGACGGAACTCGTAAAGTATGGTCATTCGGTAACATTGCAACTCGTATCGACATTGCAGATGAACTTCACCGAAAACGTCCGGGTATCGTGCCACTAGCTGACCCAACTGAGGCTCTAGCTCACGGCATTGAATATGCACATCCAGAAGATGTTGCAAAACCATGGGCTGATCAGAGTCCGTTGAAAGATCACGTAATTACCGTTGAAACTTTAGATGCACGTCGTGCAGCCGAAGATCAAGTCGGTATGGCTCGTATCGCGACTCTTGGTGTTGATGAAGCACTTGAAGAATCACGTTCTGGCGCGTTAGTTCGCTACCCAGATAGTGCATTCCGTCATGACATCATGATCACGCCGAGAAGCTTGAACGCTCGTACAGCAACTGAAACACGTCGCGGTGTTGTTGAAATTGCGACACAGACTGAAACACGTAGCACAACTAACGATGTGCAAGTGATCACGCCTAAGAAGTTTCATGCTGCGCAAGCGGAAGAGAATTTAACAGGCGTTGCAGAACTTGTCAAGGCGTCAAACAACATTAACGCTAATGGCACAGTAGCTTCCACTGCAAATATGCGTTCTGACAGAACAGTTAACGGTGTTGTTGATACTGTATATGACAAAACTGATCATCTTCGCATTGTAACTCCGAAAATGCTTGATGAATATCGAGCTACTGAGAACCAACCGGGTACTCTATGGGTTGCTAAGAGCACTGAGCTTCGTGTAAACGACTCAACAGTTGATGATGCAATCATCACGCCTAAGAAATTAGCAGCGTGGAAAGCAAGCTCAACAATTCGCGGTATTGCACGTTCAGCAACTCAAGCTGAAACAAACGCAATCAGCGGGACAGGTGAAGCGTGGACAACTGTTTTCGTTACACCTGAGACATTAAACAGTCGTACAGCGACTGAATCTCGTCGCGGTGTTGCTGAGATTGCAACTCAAGTCGAAGTTGACGCAGGGACTGATGATACACGTATAGTTACGCCTCTGAAAGTTGCAACATGGCTTGCATACGATCACTTTACTAGTGATGGCGTTGCTCAAGGCGCGGGTTACGGCGTATCGGGTATCTCACATACAGGTGACATTTGGAACGGCATCAATCTAGAAATCGCACTGGCAACAACAACGCAACGCGGTACCCTAGAAACAGCGACTGAAACAGAAGCTAAAGTTCAGCAAACGTGGAACGGTACGTCTTGGGACGGCACAGCAGCAGCAGCCGATAAAATTGTCACACCATTGACACTTGATCGCCGTCGTGCCACTGAAACACAATACGGTCTTGCACGTCGTGCAACAAATGCTGAAATTGACACTGCGACAATCGGTGGCGTTGATAACACACCAGTTTACGTATCGCCAAAAGACTTGCTTCGTTGGACTCGTACTTCTACGAATTCACGTTCTGATGAAACACGCTTCGGTGTTGTTCGTCTAGCTACGCCAGCAGAAACATTCGTTGGTAACAGCACTGACGGTTCAACTCAAGCATATACAGCTTACTTGCGTACACCGTATGCAGTTACGCCGTACAGCTTGAATTATGCATTGCGCAACTACTTGCCATTGAATGCAAAGGCTGATGACTCAGAATTGCTAGATGGTTTAGACAGTACTCAGTTTGCTCGTCGTGATATTAATCAAACGATCAACGGAACTTATACGTTCAATGCTAAAAACGTCGAAATTAATGCAGGTGGCTGGCTTCAAGTACAGAATGCACCGACTGGTGATATTGTTAAGCTAGATTGGTTTGATTCTGCTCCCCGCATTCGCGTCGGGGGAAGCGGTGCTTCATCAACTGCTACGTTCTCGATTCAAGGCGCGGCTGATTTTGTTCGCTGGCAAGTTAATTCGTCTGGTTATACTACACAAGCAAGTGGTGCGACTTTCGGTAGCACAGTTACTGAAAACGAATCAAGCGCAAACGTTGATGCAACATACGGGACTTATTCAAGCCCAGCAGCAGGTACACTTCGTCAGAAGTACTTGGGTATCAATAACGTAGCAAAAGCGGCTGAGAAGTGGGTTACAGCGCGTACAGTGACGTTCACTGGCGACTTGACTGGTAACTTCACAATTGACGGAAGCGGAAACGTTTCTACAAACGTGCAAGTTAACGACAATAGTCACAATCACTCAGGTGAGAACATCACGAGCGGTACGATCTCGAACGACCGACTAATCAAGTCAAGTCGTACGAACCCAGGTATTGTTCAAGTAACAAGTGATGTACGTACAGCAGACCCAGTGAATGCTTCAGACCCACACCAAGCTCTATCGGCTGGTGCAGGTAAGACTCTATCTGAGCGAATTGACTTGTTCACGCCAGATGGCGGTACTGGTGACAACGTTAAATACAGAGACTACATTCAAGTTGGCTCTGTAAGAATGTCAACAAACAATCAAGGCGTGCTGGAGTTCACATTCGGTCACGCAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2a01d07b26d323e741e1083e7a1cbb0285c8cafe3fe916e8c6c725e2eecac7f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5321
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50