Protein
View in Explore- Genbank accession
- WAX25904.1 [GenBank]
- Protein name
- tail family protein
- RBP type
-
TSP
- Protein sequence
-
MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPIDFTPKYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYKKSIDKNTDFVLDGVYAYRDINRVGIDTNRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
- Physico‐chemical
properties -
protein length: 274 AA molecular weight: 31203,68130 Da isoelectric point: 5,27627 aromaticity: 0,14234 hydropathy: -0,26022
Domains
Domains [InterPro]
IPR008841
STR
8–126
STR
8–126
1
274
Architecture
STR 8-126 | STR 133-274
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
274
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 192 | 192 | 0,9448 |
| Central domain | 193 | 263 | 72 | 0,1123 |
| C-terminal | 264 | 274 | 10 | 0,2588 |
Note: Constraints were applied during segmentation.
Fixed 8 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 8 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-192
1-192
Central
193-263
193-263
C-terminal
264-274
264-274
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Staphylococcus phage phiSa2wa-st80.4 [NCBI] |
3003634 | No lineage information |
| Host |
Staphylococcus aureus [NCBI] |
1280 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WAX25904.1
[NCBI]
Genbank nucleotide accession
OP661217
[NCBI]
CDS location
range 33845 -> 34669
strand +
strand +
CDS
ATGCAATCTTTTGTAAAAATCATAGATGGTTACAAGGAAGAAGTAATAACAGATTTTAATCAACTTATATTTTTAGATGCAAGGGCTGAAAGTCCTAACACTAATGATAATAGTGTAACTATTAACGGAGTAGATGGTATTTTACCGGGCGCAATTAGTTTTGCGCCTTTTTCATTAGTATTAAGGTTTGGCTATGATGGTATAGATGTTATAGATTTAAATTTATTTGAGCATTGGTTTAGATCTGTATTTAATCGTAGACATCCTTATTATGTTATTACTTCTCAAATGCCTGGCGTTAAATACGCAGTGAATACAGCTAATGTTACATCTAATTTAAAAGATGGTTCTTCAACTGAAATTGAAGTAAGTTTAAATGTTTATAAAGGATATTCTGAATCAGTTAATTGGACTGATAGCGAGTTCTTATTCGACTCTAATTGGATGTTTGAAAATGGAATTCCTATTGATTTCACACCTAAATATACTCATACATCAAATCAATTCACTATTTGGAACGGTTCTACTGATACGATAAATCCACGATTCAAGCACGATTTAAAAATATTAATTAATTTAAATGCGAGTGGAGGATTTGAACTGGTTAACTATACAACAGGTGATATTTTTAAATACAAGAAAAGCATAGATAAAAACACTGATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAATAGAGTCGGAATTGATACAAATAGGGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTCAGTGATATTAAAACAACATTTAAGTTTCCTTTTATTTATAGGTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
9391c728a01f2efa83661be9a0470fdb991080c46441294c9093ac0d68520ec1
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50