Protein

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Genbank accession
BBI47401.2 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTVTTTLDRQYFPGDGSNKNFPFNFKFFDNSQIYVYLIDPAGGVVGKVLNVDYTISGALSPVGGQVVMSVAPALNYQVLIQRKLTITQPTSIRNQGAFFPAIHEDVFDRLTMLVQQAIFEVGNGLQKNAAGLAWDFKGLRGVNAANPINAQDVATKNSVELYVSSILLTGQGPVNNASNVLYVYPDGVTHVVQDLSSPTGVKGIGTPGGNLGDLLDKTLGFQNVAAMAAASIPSTLNYLVTACAQTPGYGGRVFTRYTGSYAADGWCIVQTADGSKWKAVGVPDPQLFGAVNGTDITSAMQRFINYAATRREPEMNWSINGIISSPVVGTVGVGSSDYCRNIKGKLSLAEPAATVAGTLFTMTNFIQTTIGDGEYIGSILYSARKAWGAFKFIGCKYLTGGDFYIVGCVRWGMECTNYTTEFKFGHLKFLYCGSSNSQGVTFSATTHFRTGSVLSQRSNFQVFTPPAGVRSGDGLLINGTYYHIRVIDTSGQTMQVFPALDSVDLANISGAYWIMGGGFRHGDGEANAGYISRLSGLVCAIDCACDDLYPVTIGKAASQVSVVRVRIGVDRDAAYRGGATLDTYTEGTKIDTVVLGQGGDVITGTPYSVGHTGQFTPVVPYQFADYINDDLTKNSLRNTPVLMTDVNKRSVVPRTMQTPVVSTQGGNTEVTVIAVQEVGGGYGKVNQLSLDKARASGNGCYSLSMFFFGASTGNPGTVTLQDASGTGVTVMGEAIHNLVMTGPTMVFAMFINNNWTVYKGAAFVNG
Physico‐chemical
properties
protein length:766 AA
molecular weight: 81452,20450 Da
isoelectric point:6,70805
aromaticity:0,10183
hydropathy:0,04961

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BBI47401.2
1 766
Domain Start End Length (AA) Confidence
N-terminal 1 296 296 0,9983
Central domain 297 645 350 0,9504
C-terminal 646 766 120 0,9790
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-296
Central
297-645
C-terminal
646-766

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HU1
[NCBI] 		2056127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas lactis
[NCBI] 		1615674 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBI47401.2 [NCBI]
Genbank nucleotide accession
AP019415.2 [NCBI]
CDS location
range 1 -> 42551
strand -
CDS
ATGACCGTAACGACAACGCTTGACCGTCAGTATTTCCCAGGCGATGGGTCTAACAAGAATTTCCCATTCAATTTTAAGTTCTTTGATAACTCGCAGATCTACGTCTACCTTATCGATCCTGCTGGGGGTGTTGTAGGAAAGGTTCTGAATGTTGATTACACGATATCCGGAGCCTTATCACCAGTAGGTGGCCAGGTTGTCATGAGCGTGGCTCCGGCTCTTAATTATCAGGTTTTAATACAGAGAAAACTTACCATCACCCAGCCTACGTCTATACGAAATCAGGGAGCTTTTTTCCCGGCTATCCATGAGGATGTTTTCGATAGACTCACAATGCTCGTTCAGCAGGCTATTTTTGAAGTGGGGAATGGCCTTCAAAAGAATGCAGCTGGTCTTGCTTGGGACTTTAAAGGATTGCGCGGTGTTAACGCTGCCAACCCGATAAATGCTCAAGATGTGGCCACAAAAAACTCTGTTGAGCTTTATGTTTCATCAATATTGCTGACGGGTCAGGGTCCAGTTAATAACGCTTCAAATGTACTTTACGTATATCCAGACGGAGTAACACACGTAGTCCAAGACCTTTCTTCCCCTACAGGCGTGAAGGGCATCGGTACCCCCGGTGGAAACCTTGGTGACCTGCTGGATAAGACCCTTGGGTTTCAGAACGTTGCGGCCATGGCTGCGGCGTCTATCCCTTCAACATTGAATTACCTGGTTACCGCCTGTGCGCAAACCCCTGGTTATGGCGGTCGGGTTTTCACCAGATACACAGGATCTTATGCGGCAGATGGCTGGTGCATCGTTCAGACGGCAGATGGTTCTAAATGGAAGGCTGTAGGCGTTCCTGACCCCCAGCTGTTTGGAGCTGTCAATGGCACCGATATCACCTCAGCCATGCAGCGATTCATTAACTACGCCGCCACACGCCGAGAGCCAGAGATGAACTGGTCGATCAACGGGATCATCTCGTCGCCTGTTGTTGGCACGGTAGGTGTTGGTTCAAGCGACTATTGCCGAAATATCAAGGGCAAGCTGTCCCTAGCCGAGCCAGCCGCGACTGTTGCCGGAACGTTGTTCACGATGACGAACTTTATCCAGACGACCATTGGCGATGGCGAGTATATCGGCTCGATCCTTTACTCGGCCCGCAAGGCATGGGGCGCGTTTAAATTCATCGGATGCAAATACCTAACCGGTGGCGATTTCTATATTGTCGGATGTGTTCGGTGGGGCATGGAATGCACAAACTATACGACCGAATTCAAATTCGGCCACCTCAAGTTCCTTTATTGCGGGTCTTCTAATTCGCAGGGGGTCACATTCTCGGCTACAACGCATTTCAGAACAGGCTCAGTTCTTTCTCAGCGAAGCAACTTCCAAGTGTTTACGCCTCCAGCCGGCGTTCGTTCAGGAGACGGCCTCCTGATCAATGGCACTTACTACCACATACGCGTTATCGACACGTCGGGCCAGACGATGCAGGTTTTCCCAGCGCTTGATTCAGTCGACCTGGCCAACATCTCTGGAGCTTACTGGATCATGGGTGGTGGGTTCCGTCATGGCGACGGAGAGGCGAATGCTGGCTACATTTCCCGCCTTTCCGGCCTGGTTTGCGCTATTGATTGCGCATGTGATGATCTGTACCCGGTAACGATAGGGAAAGCAGCTTCTCAAGTATCCGTGGTCCGTGTTCGTATCGGCGTAGATCGTGATGCTGCCTACCGCGGCGGGGCCACGCTTGACACTTACACTGAGGGCACAAAAATTGACACCGTTGTTCTTGGGCAGGGCGGCGATGTAATTACAGGCACTCCGTATTCTGTCGGTCACACCGGCCAATTCACACCCGTTGTTCCTTACCAGTTTGCTGATTACATCAATGACGACCTGACAAAAAACTCTTTGCGAAACACTCCGGTCCTGATGACGGACGTCAATAAAAGGTCGGTTGTTCCGCGAACCATGCAGACCCCGGTTGTCAGCACCCAAGGCGGAAATACAGAGGTGACTGTCATTGCAGTGCAGGAGGTAGGCGGGGGTTACGGCAAGGTTAATCAGCTGTCTCTGGACAAGGCTAGGGCATCTGGAAACGGCTGCTACAGTTTATCAATGTTCTTTTTTGGGGCATCTACGGGTAACCCGGGGACAGTCACTCTTCAGGATGCTAGCGGAACAGGAGTTACGGTTATGGGTGAAGCCATACATAACCTAGTTATGACTGGGCCAACCATGGTTTTTGCCATGTTCATAAACAACAACTGGACCGTCTATAAAGGCGCTGCGTTTGTTAACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
098c12cff759ccd2843e2783238b755b60cd5957dbf4e5ab34af87bd468cf5e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6582
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50