Protein

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Genbank accession
YP_009887012.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,66
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MALDPNINRIKFLRSSTAGAKPTTAAIQPGEIAINLADRTLYSTDGNAIIDIGFGLGGSVNGPINATGQISTNDFLYSKYGFSVNSETADGRGISLYGNGYTASNGLPSYGLAMAATSKYGTFGAVSGSHATYLTTNSGTNRGWIFNYNGTTNVASISGTGIATFARVDAPLNGNANTATKLQSARNINGVLFDGTSDINTPAITDVVSFDNRTVKPSDVRNKAMGVYFTSKAGLNGAGDTNYGDFLSLSTYQDGTGGKVNGLYFNKLSREILHYQSDLNSNSWGTPKTIAYTDSSITGNAASATRLQTARTINGTAFDGTANINVNATYSEFIPDGANLNDYKTPGLYYCPTDAGAATQLNLPFSNAYSLFVERHAGIKQTITQYASNKTFIRKFYNGYWDNWRQLAFLDPSDQKFTENITLEKASSAATINVKTTTDNTSELVLSNRNKTASVGLVPDGTFFIWDSSRQTSFMSFTPDGVQSVLNSKLLINTPASLNSTGQETFTVTGGESSPIRFKINRAGAITTNSPVTGVSSIPHAISFNWYNTEWQIGNARDGSTGTVGFGITKGNDTLVWRHDGNSMTNYGNISNTGWISAQGDISSNGNISNTGSISTQGNISSNGNLSTAGSISGDSLITRTGRIGAPTSTYHYLDIGRDGTDITTVGQYGGAFRVVDTSNGATSFYVDSVDAKFSGKITTKPVTFYWNVTDLGNSTAAITVPDAIAPISKTGYAPFIHGSVQTDGIGYRTNVSIGAWRGSNTWTSSGAYIAIGGNDNYTTEDFRFMTGGYIGTSGGTLNILGTLNAPTLTSTTGSFTTVNTTNINAQGSIVMSAAPGGSGRSGMYTGNGDGASFSTCNIDIGSHWGLGFKDNLGNRNIIFDTRAGNASFKGSIRIGASFADETQLLPTSNQLQILTSGGQARNISTGGVLASDAYADASKVPVNGIYSKGDIKTSTWVYASKFTGPTGSGDGMFDGNASTATKLQTARTFQITGGITTNAVSFDGQQNVVLTASNVDGSKVTGVVPEAVKAQTLAVTPQKNAKLVASWKGTILQSMTPTLTIVDANTLRVRLADDSPSNRLPVLRFNVKIGTVYHLAFSDTMLPINGTVTFVQTGLTWVEVDLNSPNHGLSGSGNGVNVMAITYSAYGCYFEGSISQIIGTTGPKDSQWAYVLKLNSPTTDATYNLSGSSQDATWVADKNIWYLNPAQPVITAGAMISPDRLNFFAADTDAPTRMRSNMVTAQIWDIV
Physico‐chemical
properties
protein length:1248 AA
molecular weight: 131546,74560 Da
isoelectric point:6,58181
aromaticity:0,09375
hydropathy:-0,21731

Domains

Domains [InterPro]
DC_0113
STR
1–80
DC_0113 DC_0113
cd19958
STR
334–408
cd19958 IPR005601
YP_009887012.1
1 1248
Architecture
STR
STR
STR 1-80 | STR 83-1248
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009887012.1
1 1248
Domain Start End Length (AA) Confidence
N-terminal 1 1054 1054 0,0888
Central domain 1055 1237 184 0,3786
C-terminal 1238 1248 10 0,7569
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1054
Central
1055-1237
C-terminal
1238-1248

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_Lazarus
[NCBI] 		2686289 Uroviricota > Caudoviricetes > Pantevenvirales > Twarogvirinae > Lazarusvirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009887012.1 [NCBI]
Genbank nucleotide accession
NC_049493 [NCBI]
CDS location
range 155197 -> 158943
strand +
CDS
ATGGCATTAGATCCAAATATTAACAGAATTAAATTTTTACGATCTTCTACTGCTGGAGCTAAACCTACTACTGCAGCGATTCAACCAGGCGAAATTGCTATCAATTTGGCAGATAGAACTCTTTACTCAACCGATGGTAATGCTATTATTGATATCGGTTTTGGTTTGGGTGGAAGTGTCAATGGGCCAATAAATGCAACAGGGCAAATTAGTACCAATGACTTTTTATATTCAAAGTATGGATTTTCTGTAAATTCAGAAACTGCAGATGGACGCGGTATTTCATTATATGGTAATGGATATACCGCATCAAACGGTCTGCCGTCATACGGGCTTGCGATGGCTGCTACAAGTAAATATGGTACATTTGGTGCTGTGTCAGGTTCGCACGCAACTTACCTTACTACAAACTCAGGTACTAACCGTGGTTGGATTTTTAACTATAACGGGACTACCAATGTAGCTTCAATTTCGGGAACCGGCATTGCGACATTTGCTCGTGTAGATGCTCCGTTAAACGGTAATGCTAATACAGCAACCAAACTTCAATCAGCTAGAAACATTAATGGCGTGTTGTTCGACGGCACATCAGATATTAATACACCAGCTATCACTGACGTCGTTTCATTTGATAATAGAACTGTTAAACCTTCTGATGTTAGAAATAAAGCCATGGGTGTTTATTTTACTTCAAAGGCAGGTTTAAATGGCGCGGGTGATACCAATTATGGTGATTTTTTATCTCTAAGCACTTATCAAGATGGCACTGGAGGAAAGGTAAACGGTTTATATTTCAATAAATTATCTCGAGAAATATTACATTACCAGTCAGATTTAAATTCAAATTCGTGGGGAACTCCGAAAACGATTGCGTATACAGATAGTTCTATTACCGGCAATGCTGCATCAGCAACACGCTTACAGACAGCCAGAACTATCAATGGTACTGCATTTGATGGTACTGCGAATATCAATGTCAATGCTACATATTCGGAATTTATTCCTGATGGCGCGAATTTAAATGATTATAAAACTCCAGGGCTATATTATTGTCCTACTGATGCTGGTGCAGCGACTCAATTAAATTTACCGTTTAGTAATGCGTATTCGTTGTTTGTTGAGAGACATGCTGGAATTAAACAGACCATTACCCAATATGCGTCAAATAAAACTTTTATTCGTAAATTTTATAATGGTTATTGGGATAATTGGCGTCAATTAGCTTTCTTAGACCCAAGTGATCAGAAATTTACAGAAAATATCACTTTGGAAAAAGCTTCTTCTGCTGCAACAATCAACGTTAAAACTACTACTGATAATACTTCTGAACTTGTTTTAAGTAATAGAAATAAAACAGCGTCTGTAGGACTTGTGCCAGACGGTACTTTTTTTATATGGGATTCAAGTAGACAAACATCATTCATGTCATTTACGCCAGACGGTGTGCAATCTGTATTGAATTCTAAGTTGTTGATTAATACTCCAGCATCATTGAACTCTACCGGCCAAGAAACATTTACTGTTACTGGTGGAGAAAGCTCTCCGATTAGATTTAAAATTAACCGCGCTGGGGCAATCACTACTAACTCGCCTGTTACTGGTGTTTCTTCTATTCCCCATGCTATATCATTTAACTGGTATAATACAGAATGGCAAATAGGTAACGCCCGTGATGGTTCTACTGGTACTGTTGGTTTTGGTATTACTAAAGGTAATGATACGTTAGTATGGCGCCATGATGGTAATAGCATGACCAACTACGGTAACATTAGTAATACGGGTTGGATCAGTGCGCAAGGAGATATTTCATCTAATGGTAACATTAGTAATACAGGTTCGATCAGTACGCAAGGAAATATTTCATCTAATGGTAACTTGAGTACTGCAGGTTCAATCAGCGGAGATAGTTTAATCACTAGAACTGGTCGTATCGGTGCGCCAACATCTACGTATCACTATCTCGATATCGGTAGAGACGGTACAGATATTACTACGGTCGGTCAATATGGAGGTGCATTTAGAGTTGTTGATACATCTAATGGAGCTACTTCGTTTTATGTAGACTCGGTTGATGCTAAATTTTCAGGTAAGATTACTACAAAACCTGTGACTTTCTATTGGAATGTAACAGATTTAGGTAATTCTACTGCAGCTATCACGGTTCCAGATGCTATTGCTCCTATAAGTAAAACTGGATATGCTCCTTTTATTCACGGTTCTGTCCAAACCGATGGTATTGGATATAGAACTAACGTATCTATTGGTGCTTGGAGAGGTTCTAATACTTGGACATCTTCAGGTGCTTATATTGCTATTGGCGGTAATGATAACTATACGACAGAAGATTTTAGATTCATGACTGGTGGTTATATTGGCACAAGTGGCGGTACTTTAAATATCTTAGGTACTTTAAATGCACCTACTTTAACATCTACAACTGGATCTTTCACTACCGTTAATACAACAAATATTAACGCCCAAGGCAGTATTGTGATGAGTGCTGCGCCTGGTGGATCTGGGCGCAGCGGTATGTATACAGGAAATGGTGACGGTGCGTCCTTCTCTACCTGTAATATAGATATAGGTTCTCATTGGGGCTTAGGATTCAAAGATAATTTAGGAAACAGAAATATTATCTTTGATACCCGTGCAGGTAATGCGTCGTTTAAAGGATCTATTAGAATCGGTGCATCTTTTGCTGATGAGACTCAATTATTACCTACATCAAACCAACTTCAAATATTAACTTCAGGCGGTCAAGCTAGAAATATTTCGACTGGTGGCGTATTGGCTTCTGATGCTTACGCCGATGCTAGTAAAGTTCCAGTAAATGGTATCTACTCAAAAGGTGATATTAAAACATCTACATGGGTATATGCATCTAAATTCACCGGTCCTACTGGATCAGGTGATGGTATGTTTGACGGTAATGCATCTACTGCAACCAAATTGCAAACTGCAAGAACTTTCCAAATTACTGGCGGCATCACTACAAATGCAGTATCATTTGACGGACAGCAAAACGTAGTGTTAACTGCAAGCAATGTAGATGGTTCAAAAGTTACAGGCGTGGTTCCTGAGGCGGTTAAAGCGCAAACTCTTGCAGTGACACCGCAAAAAAATGCGAAATTGGTTGCATCATGGAAGGGTACCATATTGCAATCTATGACGCCTACACTAACTATTGTTGATGCAAATACACTTCGTGTTAGATTAGCAGACGATAGTCCGAGTAACAGATTGCCAGTATTGAGATTTAATGTGAAAATCGGCACAGTGTATCATCTCGCATTTAGTGATACTATGTTGCCGATCAATGGCACAGTAACTTTCGTCCAAACTGGGTTAACATGGGTTGAAGTTGATCTTAATTCACCTAACCACGGGCTATCAGGTTCAGGCAATGGTGTAAATGTTATGGCGATAACATATTCTGCATATGGTTGTTATTTTGAGGGCTCAATTAGCCAAATCATTGGCACAACAGGACCGAAAGACAGTCAATGGGCATATGTATTGAAACTCAATTCTCCGACAACTGATGCTACATATAATCTTAGCGGATCTTCGCAAGATGCAACATGGGTTGCAGATAAAAATATTTGGTATCTTAATCCTGCGCAGCCGGTGATAACTGCAGGCGCTATGATTTCTCCTGATAGATTGAATTTCTTCGCTGCTGATACAGATGCTCCAACAAGAATGCGTTCTAATATGGTAACTGCACAAATCTGGGACATTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0424b0c7344fd29e704e5d25131b650e8d0f7b3a2e1923c574efe7107f42abf4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4683
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50