Protein

View in Explore
Genbank accession
QLA10757.1 [GenBank]
Protein name
straight tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSNTFSHISDESRYVSFDPTGTAFPSTVKNIQDALASLNGVAVNGNTLATTEAPGVIRIATQPEVDAGISNSTVVTPATLKNAILKPPATTTEAGIARLATQDEVNTGTNSNTIVVPSTLAVYVASKLVIAATESVQGTIKLSTEAAAKAGVDDTTAMTPLKTRMAIAAATSILPAWGQATETVQGVVTLATGAQTIAGSLREGYAVSPYGLAQLIATTDKRGLAQIATQVEVVAGTDTTKYITPSTLISRTGTTARLGLVKLTNTVGTGDGSTALSANADVVHTRGGQSIAGNTSFGNISASSATVNGKQVATIDMIKDSVPVGVIYIWPGASVPTQDYLVCDGRSLSTSIYSELFSKIGYTYGGSGGTFNIPDMRGMFVRGVGTSSHIQNAMATDNKGKEGLGVGCSGSALGGVQAQQVRYHKHDSGWGEYPGRTTDARNGMSATRGFQGAKNHDWDNYKYFTNDGNEVDPESIRTPTSTMNSKSLIGKENRPWNISMYYVIKVK
Physico‐chemical
properties
protein length:507 AA
molecular weight: 52762,44280 Da
isoelectric point:7,70551
aromaticity:0,05917
hydropathy:-0,13984

Domains

Domains [InterPro]
DC_0176
STR
1–425
DC_0176 IPR027448
G3DSA:2.10.280.10
Unmapped
244–281
G3DSA:2.10.280.10 IPR037053 IPR044916
SSF69349
STR
244–332
SSF69349 IPR027448
IPR015173
STR
245–297
IPR015173 SSF88874
IPR011083
ATT
325–381
IPR011083
QLA10757.1
1 507
Architecture
STR
ATT
STR
STR 1-310 | ATT 311-381 | STR 382-506 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage Thanatos-2
[NCBI] 		2734809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLA10757.1 [NCBI]
Genbank nucleotide accession
MT457553.1 [NCBI]
CDS location
range 150068 -> 151591
strand +
CDS
ATGAGTAATACATTTTCACATATTTCAGACGAATCGAGATATGTTTCATTTGACCCTACTGGGACTGCATTCCCTAGTACAGTTAAAAATATCCAGGATGCACTAGCTTCACTTAATGGTGTAGCTGTTAATGGAAATACACTAGCGACTACTGAAGCCCCTGGCGTCATAAGGATTGCAACTCAGCCTGAAGTAGATGCCGGTATATCTAACTCTACTGTAGTTACACCTGCAACATTAAAAAATGCCATTTTAAAACCACCTGCTACTACAACAGAAGCAGGTATTGCTAGATTAGCTACCCAGGATGAAGTTAATACAGGAACAAACAGTAATACTATTGTTGTCCCTAGTACATTAGCAGTTTATGTTGCTTCTAAACTTGTTATTGCCGCCACAGAATCAGTTCAAGGAACAATTAAGCTCAGTACAGAAGCAGCAGCTAAAGCCGGTGTAGATGACACCACAGCAATGACCCCATTAAAAACCCGTATGGCCATAGCAGCAGCAACTTCTATTTTACCTGCATGGGGCCAGGCAACTGAGACTGTCCAGGGTGTAGTTACATTAGCCACAGGTGCACAGACCATAGCAGGCTCTTTAAGAGAAGGCTATGCAGTTTCACCATATGGATTAGCCCAATTAATAGCTACCACAGATAAACGTGGACTTGCCCAAATAGCAACTCAAGTGGAAGTAGTAGCAGGAACAGATACAACAAAATATATTACGCCTTCTACTTTAATTTCTAGAACAGGGACAACTGCCCGTCTAGGTTTAGTCAAATTGACTAATACTGTGGGAACAGGTGATGGCTCTACAGCATTATCTGCTAACGCGGATGTAGTTCATACTAGAGGCGGTCAGTCTATTGCAGGTAATACTTCATTTGGAAATATCTCTGCTTCTAGTGCTACTGTAAACGGTAAACAAGTTGCTACAATAGATATGATTAAGGATTCTGTCCCTGTAGGTGTAATTTATATTTGGCCAGGGGCTTCTGTTCCTACACAAGATTATCTTGTTTGTGATGGACGTTCACTTAGTACTTCAATTTATTCTGAATTGTTTAGTAAAATTGGATATACTTATGGTGGCTCTGGTGGAACATTTAATATCCCGGACATGAGAGGTATGTTCGTTCGTGGTGTAGGAACAAGTTCACATATCCAAAATGCTATGGCTACAGACAATAAAGGTAAAGAAGGATTAGGTGTAGGTTGTTCAGGTTCAGCATTAGGTGGTGTACAAGCCCAACAGGTAAGGTACCATAAACATGATTCCGGTTGGGGTGAATATCCAGGTAGAACAACAGACGCACGTAATGGTATGTCTGCTACTCGTGGATTCCAAGGCGCCAAAAACCATGATTGGGACAATTACAAATATTTCACTAACGATGGAAATGAAGTAGACCCAGAATCAATCAGAACCCCAACAAGTACGATGAATTCTAAGAGTCTAATAGGGAAAGAAAACAGACCATGGAATATTTCCATGTATTACGTAATTAAAGTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ea953245b2bf2ff85c965f3f8962b943b91c115986d6818b0ab0136a40a72e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7057
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of phage Thanatos infecting and lysing Shewanella oneidensis and promoting nascent biofilm formation Kreienbaum,M., Doerrich,A.K., Brandt,D., Leonhard,T., Hager,F., Brenzinger,S., Hahn,J., Ruwe,M., Briegel,A., Kalinowski,J. and Thormann,K.M. 2020-09-18 — GenBank