Protein

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Genbank accession
YP_009211602.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTIRHVSDESSYKIFNPAGTGFPPTITNVQDALASINPQAVNGIPNATQATIGISRFGTQAEIDAGVLTTVGVSPATLKSAVTRPPATTTVSGLTRYATSPESIAGTIDNAAIVPSGLKAALDNRTAIILNTQATELTMGVGKISTQVAALAGVDDLTIMTPKKVAIAIAAATATLPVYSNATTTNSGLVRIATSGEVQAGTLDTGVAVSPAGLRNFISTTARRGIIQLATLQEVSDGVNNDKAITPATLLGRTGSTIRLGVVKLTTTAGVGDSSTALAYNADVIHQRGGQTITGNLNIIGSLEIDRLIVHGSGEFTESLNVRGNLTQNSKQVVTIDMLGSAVPIGFIGMWGTNAPLEPGWRDLDGWAGYLGDPNYAKLQSLYPTGLPDARGLFMRGAGVGKHITDETGTDAKGKNKLGNGCGGGVVGTVQPQMLRKHKHIVPWGEHWGGPFGNSAYGGREGSHSTDHDNVWYFSNDGEEIEPAIHRGPGNTLNTEGLMGDENRPWNMSIRYIIKVQ
Physico‐chemical
properties
protein length:520 AA
molecular weight: 54156,27480 Da
isoelectric point:6,37440
aromaticity:0,05000
hydropathy:-0,11596

Domains

Domains [InterPro]
DC_0176
STR
1–445
DC_0176 IPR027448
SSF69349
STR
249–314
SSF69349 SSF88874
G3DSA:2.10.280.10
Unmapped
249–286
G3DSA:2.10.280.10 IPR044916
IPR015173
STR
249–309
IPR015173 IPR027448
YP_009211602.1
1 520
Architecture
STR
STR 1-519 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium bacteriophage PM2
[NCBI] 		1429794 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosugukvirus
Host Pectobacterium
[NCBI] 		122277 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009211602.1 [NCBI]
Genbank nucleotide accession
NC_028940 [NCBI]
CDS location
range 93918 -> 95480
strand +
CDS
ATGTCTACCAATACAATACGTCACGTCAGTGACGAATCATCATACAAAATTTTTAACCCGGCTGGAACCGGGTTTCCACCAACAATAACAAACGTTCAAGATGCTTTGGCATCTATTAATCCGCAAGCGGTTAATGGAATTCCTAATGCGACACAGGCCACCATAGGAATAAGTCGTTTTGGAACCCAGGCGGAGATAGACGCCGGTGTACTTACTACGGTTGGTGTTTCTCCAGCTACTTTGAAATCGGCCGTCACGCGCCCACCTGCAACTACCACAGTTAGTGGATTAACACGTTATGCAACTTCGCCGGAATCTATTGCCGGGACAATTGATAATGCTGCTATTGTTCCTAGTGGATTAAAAGCTGCTCTGGATAATAGAACCGCTATTATTTTAAATACTCAAGCAACTGAACTCACAATGGGCGTAGGCAAAATCTCTACACAAGTCGCAGCATTAGCTGGTGTAGATGATTTGACGATAATGACTCCTAAAAAAGTTGCTATTGCTATTGCTGCCGCAACAGCTACATTACCAGTTTATAGTAATGCTACGACAACAAACTCTGGTTTAGTCCGTATTGCAACAAGTGGTGAAGTTCAAGCAGGAACATTAGATACTGGTGTAGCAGTTTCTCCGGCAGGATTAAGAAATTTTATTTCTACTACAGCACGAAGAGGTATTATTCAATTAGCTACTTTACAAGAAGTTTCTGATGGGGTTAATAATGATAAGGCTATTACACCTGCAACATTATTAGGAAGAACAGGTTCTACTATACGACTTGGTGTTGTTAAATTAACTACTACTGCTGGCGTTGGTGATTCTAGTACTGCATTAGCTTATAATGCTGATGTTATTCATCAAAGAGGTGGACAAACTATAACTGGTAATTTGAATATTATCGGGTCTTTAGAAATTGATCGTCTTATTGTTCATGGTTCTGGTGAATTTACTGAAAGTCTTAACGTTCGTGGTAATTTAACTCAGAATAGTAAACAAGTAGTAACCATTGATATGCTTGGTTCTGCGGTTCCTATTGGGTTTATTGGGATGTGGGGCACTAATGCTCCATTGGAACCAGGCTGGAGAGATTTAGATGGCTGGGCAGGATATTTAGGTGACCCTAATTATGCTAAATTACAATCATTATACCCTACTGGTTTGCCTGATGCAAGAGGATTGTTTATGCGTGGTGCTGGCGTAGGTAAACATATTACAGATGAAACCGGTACTGATGCAAAAGGTAAAAATAAATTAGGTAATGGCTGTGGCGGTGGCGTTGTCGGTACTGTTCAACCACAGATGCTTAGAAAACATAAACACATTGTTCCATGGGGTGAACACTGGGGTGGTCCTTTTGGTAACTCTGCATACGGTGGAAGAGAAGGTTCACATTCTACAGACCATGATAACGTGTGGTATTTTTCTAATGACGGCGAAGAAATAGAACCAGCTATTCATAGAGGCCCAGGTAATACTCTGAATACTGAAGGTTTAATGGGTGACGAAAACCGTCCTTGGAATATGTCTATACGTTATATTATAAAAGTTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
019dd9e31c247a1ae879e469232230f94602079f610d6d86c579b6d5fc9a20b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7041
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50