Protein

View in Explore
UniProt accession
A0A8S5UH71 [UniProt]
Protein name
TNF Necrosis Factor superfamily protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MVRPSLLLDTAPRNGGGRNNNNVIVQQSSVSWTYGKITGTSATDSTLPSGWVEVGIPYSNPTSHAVGESDGIATWIGARVLVIIDSSGRVVKISDPIAEPPSGAKVENLGHTGKMLSQAAKDAERAFKEADAIRDRANKAEGAANKAAKDAEKAVQIAEANRPPVVAQTAPENPVTGLIWYVTDNAGHITDVRIWDGTQWVTRTMVAGSILVPSSVGNVSLADGSVSARNIYASGELWAKIAAFASVTTEMLTAGNATFNAAKVTGDLIGNRLIGGELSLVDTEPTSGEKNIRFGLGSEYGFWESIWSPKIATVDEMEGGTRFVLTDRDRPNRNDGAQMAIYDIAVAKPKTYGIAGEGVGKVEGYILFTPSWNGRAILTINIGKNRIIAVDEQATAGQKIRFDFTLPDGAWIQDTDTPFYISARTNDVFTPGMTLGIIYSMYVSWKMSRSSGLHIFRDDEGVAKIQITDRQGGELIMDTNGVSYDPPGSPAPHASSWRTFTEPPFAHLATNNAHLWTVKDKWTKVPVGAQEKIVRGGMQVDGVEIIIPQSGLYRLDGTTWYRSSWAGYVGGTKVSRSNDDEYGVYMYAALNHGLWTALQVTGVRRLNVGDRIALYTYQNIDEGTIMDWGEMTASWLTY
Physico‐chemical
properties
protein length:638 AA
molecular weight: 68985,65580 Da
isoelectric point:5,48140
aromaticity:0,08621
hydropathy:-0,23480

Domains

Domains [InterPro]
Coil
120–140
Coil
A0A8S5UH71
1 638
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ct0eR1
[NCBI] 		2825297 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF93831.1 [NCBI]
Genbank nucleotide accession
BK016087 [NCBI]
CDS location
range 27317 -> 29233
strand +
CDS
ATGGTCAGACCGTCACTATTGCTTGACACGGCGCCACGAAACGGCGGCGGGCGCAACAATAACAATGTTATTGTTCAGCAATCCTCAGTATCATGGACGTACGGGAAAATCACCGGCACGTCCGCCACCGACAGTACGCTCCCGTCCGGATGGGTAGAAGTAGGAATCCCCTACAGCAATCCGACCTCCCATGCTGTTGGCGAATCCGACGGGATTGCCACGTGGATAGGCGCCCGCGTACTCGTCATCATTGACTCATCCGGCCGTGTAGTCAAGATCAGTGACCCTATTGCTGAGCCGCCTTCCGGTGCAAAAGTTGAGAATCTCGGGCATACTGGTAAAATGCTCAGCCAGGCCGCAAAAGACGCCGAACGTGCTTTCAAGGAGGCCGACGCGATTCGCGACCGGGCAAACAAGGCTGAAGGTGCTGCGAATAAGGCCGCGAAAGACGCGGAAAAAGCTGTCCAGATTGCGGAAGCTAACCGGCCGCCCGTAGTGGCCCAGACCGCTCCAGAGAATCCTGTCACAGGATTGATTTGGTATGTCACAGATAATGCTGGGCACATTACTGACGTGCGTATTTGGGACGGTACGCAGTGGGTTACCAGGACGATGGTCGCCGGCAGCATTCTCGTCCCCTCGTCCGTGGGGAACGTCTCACTGGCCGATGGTTCTGTGTCCGCTCGCAACATTTACGCGTCCGGGGAACTCTGGGCGAAAATCGCGGCGTTCGCGTCCGTCACTACGGAAATGTTGACTGCCGGAAACGCAACATTCAACGCGGCAAAGGTCACCGGTGATCTCATCGGTAACAGGCTTATTGGTGGTGAGCTTTCGCTTGTTGATACTGAGCCGACGTCGGGTGAGAAGAATATTCGATTCGGACTTGGCAGTGAATACGGGTTCTGGGAGTCTATCTGGTCTCCCAAAATCGCGACCGTCGATGAGATGGAGGGTGGCACGCGATTCGTTCTGACTGACAGGGATCGCCCTAATCGTAACGATGGGGCGCAGATGGCAATCTACGACATTGCTGTTGCGAAACCAAAAACCTATGGTATTGCCGGCGAGGGTGTCGGCAAGGTCGAGGGGTATATTCTTTTTACGCCGTCGTGGAACGGTCGCGCGATTCTCACGATCAACATTGGCAAGAATAGAATCATTGCCGTTGACGAGCAGGCGACGGCCGGGCAGAAAATAAGATTCGATTTCACGCTACCCGACGGCGCGTGGATCCAAGACACCGACACGCCTTTCTACATCAGTGCCCGCACGAACGATGTTTTCACGCCGGGAATGACGCTCGGAATCATTTATTCCATGTACGTGTCATGGAAAATGAGTCGCTCCTCGGGTTTGCATATTTTCCGCGACGACGAGGGTGTGGCGAAGATACAGATCACCGACCGTCAGGGCGGCGAGCTCATTATGGACACGAATGGTGTGTCCTACGACCCGCCCGGGTCGCCCGCGCCTCACGCGTCGTCGTGGCGCACTTTCACAGAGCCGCCTTTCGCCCACTTGGCAACAAACAATGCCCATTTGTGGACTGTGAAAGATAAGTGGACCAAGGTCCCGGTCGGGGCGCAGGAGAAGATCGTTCGTGGCGGTATGCAGGTGGACGGTGTAGAGATCATTATTCCGCAGAGTGGTCTTTATCGTCTAGATGGCACAACATGGTACAGATCATCATGGGCCGGATACGTTGGTGGCACGAAGGTTTCTCGCAGTAACGATGATGAATACGGCGTTTACATGTATGCCGCGCTGAACCATGGTTTGTGGACGGCGTTGCAGGTGACAGGCGTCAGGCGCCTGAACGTCGGGGATCGGATTGCACTTTATACGTATCAGAATATTGACGAGGGTACAATTATGGATTGGGGCGAGATGACGGCTAGCTGGCTCACCTACTGA

Tertiary structure

PDB ID
3ca2053c1f350ce74ced909ca3196ae5482b816c5fc6f1fe5ff8ed180550e02f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7181
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50