Protein

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Genbank accession
AFV29050.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPYFRVRDSIFYGGLNSQAIGVCVSGLSAGGYIRDNLFSDLRYGIKLAIGRQGTSVVNGPATPYNIEDNDFYRTGNRGGIDPDTQKFVQYASYDVWIEPGATATNSGRAIRFAGNKFGQEYLVSPDSHVLIADAAALGATDSLNGDKAHVETLSAGFVSGLLFEGNNVNSANGSYIAPFIRSFTPNVGNCYVGDLYDNDMPSRIIEYSPLVTQASITNLARTNIFAPKSCLGLQKGVEPKLISNLNDVFKVLDTNNWYAGHPQVPTPLVGSQQSNFVSLYAGPTSGLTVADATKTSVNNSYGGVYEASEITLASGGRAFTVVSGMVAGQQHYIDFELKRGSSNPVQSVKVEILSTDTTVLYLRRIILIDTISRWQRVILPFIPSVSGQVIVRFTSSTFIEGSATNFIVGNLNVYINNNPINTGHNGGLGGTWSIQHTVRGNRHEWYDASGNLRAKVGAPTSATDGVIISANPVI
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50856,31810 Da
isoelectric point:6,39037
aromaticity:0,09705
hydropathy:-0,07806

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFV29050.1
1 474
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0032
Central domain 11 262 253 0,9693
C-terminal 263 474 211 0,9879
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-262
C-terminal
263-474

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage IME11
[NCBI] 		1239384 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus IME11
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV29050.1 [NCBI]
Genbank nucleotide accession
JX880034 [NCBI]
CDS location
range 70 -> 1494
strand +
CDS
ATGCCATATTTTCGTGTAAGGGATTCAATCTTTTATGGCGGTTTAAATTCCCAAGCTATTGGTGTTTGCGTATCAGGGTTATCTGCCGGGGGTTATATCAGAGATAATTTATTTTCTGATTTACGTTATGGGATTAAATTAGCTATTGGTCGCCAAGGTACTAGCGTAGTTAATGGACCAGCTACTCCGTACAATATTGAAGATAATGATTTTTACCGTACCGGTAATCGTGGTGGCATAGACCCTGATACGCAAAAATTTGTTCAGTATGCATCTTATGATGTATGGATTGAACCTGGGGCTACTGCAACCAACTCTGGGCGTGCTATTAGATTTGCAGGTAATAAGTTTGGTCAGGAGTACCTAGTATCCCCTGATTCTCATGTACTGATTGCCGATGCTGCTGCCCTGGGTGCTACAGACTCCCTCAATGGGGATAAGGCCCATGTTGAGACATTAAGTGCTGGATTTGTATCTGGTTTACTTTTTGAAGGTAATAACGTCAATTCAGCCAATGGTTCTTATATTGCCCCCTTTATAAGGTCATTTACTCCTAACGTCGGTAACTGCTATGTTGGTGATTTGTATGACAATGATATGCCATCCCGCATTATTGAATACTCACCATTAGTAACCCAAGCATCAATTACTAATCTGGCTCGTACTAACATTTTTGCTCCTAAATCTTGTTTGGGTTTGCAGAAAGGTGTAGAGCCTAAGCTAATTTCTAACCTAAATGATGTATTCAAAGTTCTGGATACTAATAACTGGTACGCCGGGCATCCACAGGTCCCTACCCCATTGGTAGGTTCTCAACAGTCTAACTTTGTGTCTCTGTATGCAGGGCCAACTAGTGGGTTAACTGTGGCAGATGCTACTAAAACATCTGTTAATAACTCTTATGGAGGTGTATACGAGGCTTCTGAAATAACTCTTGCTTCAGGTGGGCGAGCCTTTACTGTTGTATCTGGTATGGTAGCTGGGCAGCAACACTACATTGATTTTGAATTAAAACGCGGAAGCTCTAACCCAGTACAGAGTGTTAAAGTTGAGATTCTCAGCACAGATACTACAGTTCTGTACCTTCGCAGAATAATTCTTATTGATACAATCTCCAGGTGGCAAAGGGTAATATTACCATTTATCCCTTCGGTATCTGGTCAAGTAATTGTAAGATTCACTTCTTCCACCTTTATCGAGGGTTCTGCTACTAACTTCATAGTAGGTAACCTTAATGTTTATATAAACAACAACCCTATCAATACAGGGCACAATGGTGGGTTAGGTGGAACTTGGTCTATTCAGCACACTGTGAGAGGTAATCGCCATGAGTGGTATGATGCTTCAGGTAATTTACGTGCTAAAGTAGGTGCTCCAACTTCAGCAACTGATGGGGTTATCATTAGTGCTAATCCTGTGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0fedf64598a5110008124fa63491d1d3a494ea9c58c31a5b345fabaa7bb48a18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6255
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of IME11, a New N4-Like Bacteriophage Fan,H., Fan,H., An,X., Huang,Y., Zhang,Z., Mi,Z. and Tong,Y. 2012 23166261 GenBank