Protein

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Genbank accession
AFV29050.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPYFRVRDSIFYGGLNSQAIGVCVSGLSAGGYIRDNLFSDLRYGIKLAIGRQGTSVVNGPATPYNIEDNDFYRTGNRGGIDPDTQKFVQYASYDVWIEPGATATNSGRAIRFAGNKFGQEYLVSPDSHVLIADAAALGATDSLNGDKAHVETLSAGFVSGLLFEGNNVNSANGSYIAPFIRSFTPNVGNCYVGDLYDNDMPSRIIEYSPLVTQASITNLARTNIFAPKSCLGLQKGVEPKLISNLNDVFKVLDTNNWYAGHPQVPTPLVGSQQSNFVSLYAGPTSGLTVADATKTSVNNSYGGVYEASEITLASGGRAFTVVSGMVAGQQHYIDFELKRGSSNPVQSVKVEILSTDTTVLYLRRIILIDTISRWQRVILPFIPSVSGQVIVRFTSSTFIEGSATNFIVGNLNVYINNNPINTGHNGGLGGTWSIQHTVRGNRHEWYDASGNLRAKVGAPTSATDGVIISANPVI
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50856,31810 Da
isoelectric point:6,39037
aromaticity:0,09705
hydropathy:-0,07806

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage IME11
[NCBI] 		1239384 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV29050.1 [NCBI]
Genbank nucleotide accession
JX880034 [NCBI]
CDS location
range 70 -> 1494
strand +
CDS
ATGCCATATTTTCGTGTAAGGGATTCAATCTTTTATGGCGGTTTAAATTCCCAAGCTATTGGTGTTTGCGTATCAGGGTTATCTGCCGGGGGTTATATCAGAGATAATTTATTTTCTGATTTACGTTATGGGATTAAATTAGCTATTGGTCGCCAAGGTACTAGCGTAGTTAATGGACCAGCTACTCCGTACAATATTGAAGATAATGATTTTTACCGTACCGGTAATCGTGGTGGCATAGACCCTGATACGCAAAAATTTGTTCAGTATGCATCTTATGATGTATGGATTGAACCTGGGGCTACTGCAACCAACTCTGGGCGTGCTATTAGATTTGCAGGTAATAAGTTTGGTCAGGAGTACCTAGTATCCCCTGATTCTCATGTACTGATTGCCGATGCTGCTGCCCTGGGTGCTACAGACTCCCTCAATGGGGATAAGGCCCATGTTGAGACATTAAGTGCTGGATTTGTATCTGGTTTACTTTTTGAAGGTAATAACGTCAATTCAGCCAATGGTTCTTATATTGCCCCCTTTATAAGGTCATTTACTCCTAACGTCGGTAACTGCTATGTTGGTGATTTGTATGACAATGATATGCCATCCCGCATTATTGAATACTCACCATTAGTAACCCAAGCATCAATTACTAATCTGGCTCGTACTAACATTTTTGCTCCTAAATCTTGTTTGGGTTTGCAGAAAGGTGTAGAGCCTAAGCTAATTTCTAACCTAAATGATGTATTCAAAGTTCTGGATACTAATAACTGGTACGCCGGGCATCCACAGGTCCCTACCCCATTGGTAGGTTCTCAACAGTCTAACTTTGTGTCTCTGTATGCAGGGCCAACTAGTGGGTTAACTGTGGCAGATGCTACTAAAACATCTGTTAATAACTCTTATGGAGGTGTATACGAGGCTTCTGAAATAACTCTTGCTTCAGGTGGGCGAGCCTTTACTGTTGTATCTGGTATGGTAGCTGGGCAGCAACACTACATTGATTTTGAATTAAAACGCGGAAGCTCTAACCCAGTACAGAGTGTTAAAGTTGAGATTCTCAGCACAGATACTACAGTTCTGTACCTTCGCAGAATAATTCTTATTGATACAATCTCCAGGTGGCAAAGGGTAATATTACCATTTATCCCTTCGGTATCTGGTCAAGTAATTGTAAGATTCACTTCTTCCACCTTTATCGAGGGTTCTGCTACTAACTTCATAGTAGGTAACCTTAATGTTTATATAAACAACAACCCTATCAATACAGGGCACAATGGTGGGTTAGGTGGAACTTGGTCTATTCAGCACACTGTGAGAGGTAATCGCCATGAGTGGTATGATGCTTCAGGTAATTTACGTGCTAAAGTAGGTGCTCCAACTTCAGCAACTGATGGGGTTATCATTAGTGCTAATCCTGTGATTTGA

Tertiary structure

PDB ID
0fedf64598a5110008124fa63491d1d3a494ea9c58c31a5b345fabaa7bb48a18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6255
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of IME11, a New N4-Like Bacteriophage Fan,H., Fan,H., An,X., Huang,Y., Zhang,Z., Mi,Z. and Tong,Y. 2012 23166261 GenBank