Protein

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Genbank accession
QEM43052.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MARGYSLGGLINDLYKLVYPVGICIDFDNATNPNTTFPGTTWVQITDNRVVRTSTSATVGTSPGQIGAIAGNDTITLVEANLPKHVHWIDHSHGIYFNSGGGGVHQHTVSGTTSDNGWHAHGIAMKGQNYGGSNGITASNSAAAKGYMDTNGAGTHNHWWSGDSSWSGDHVHLISGNTGGASMANSGDGNGSSASINAANSCHYYARWKRTA
Physico‐chemical
properties
protein length:212 AA
molecular weight: 22103,75110 Da
isoelectric point:6,65018
aromaticity:0,08491
hydropathy:-0,40991

Domains

Domains [InterPro]
DC_0294
STR
3–148
DC_0294
IPR053827
ATT
15–120
IPR053827
QEM43052.1
1 212
Architecture
STR
ATT
STR
STR 3-14 | ATT 15-120 | STR 121-148 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEM43052.1
1 212
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5915
Central domain 11 201 192 0,0023
C-terminal 202 212 10 0,9980
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-201
C-terminal
202-212

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_4HA13
[NCBI] 		2601675 Uroviricota > Caudoviricetes > Chaseviridae > Sabourvirus > Sabourvirus sv4HA13
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEM43052.1 [NCBI]
Genbank nucleotide accession
MN136198.2 [NCBI]
CDS location
range 50243 -> 50881
strand +
CDS
ATGGCTCGTGGATATTCACTTGGTGGACTAATTAATGATTTGTATAAGTTAGTCTACCCTGTTGGAATTTGCATCGATTTCGATAATGCAACAAATCCAAACACAACTTTCCCAGGAACTACTTGGGTACAGATAACTGATAACAGGGTTGTGCGAACTTCAACAAGCGCTACAGTTGGAACCAGTCCGGGGCAGATTGGTGCTATAGCTGGTAATGACACCATAACCTTAGTTGAAGCCAACCTACCTAAGCACGTCCATTGGATTGACCATTCACACGGAATATATTTTAACTCCGGTGGTGGTGGTGTTCACCAACATACAGTATCAGGAACTACCTCCGATAATGGGTGGCATGCACACGGCATTGCAATGAAGGGGCAGAACTATGGTGGCTCCAACGGTATTACCGCTTCCAACTCTGCCGCAGCGAAAGGATACATGGATACAAATGGTGCAGGTACACACAACCACTGGTGGAGTGGTGATAGTTCGTGGAGTGGTGACCACGTACATCTAATTTCAGGCAATACTGGTGGTGCATCTATGGCAAACTCTGGTGACGGCAATGGTTCAAGTGCTTCAATCAATGCTGCCAACTCCTGTCACTACTATGCAAGATGGAAACGCACTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
751ca01f2f88742aaf43ccc563cfebb5c2346b5fad37a64810d07d2ed0183691
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7179
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50