Protein

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Genbank accession
XCO36942.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTANVFSEANAVKYRLVVRGTNNDSAVNSVEVSINGADIINRRTQVARGINLAVIDGTTLALLDYKAFDMYGDPATNGNAIKDYLNSLPANRIVCFYTFDAIKSDDNFLATMRKIGSVAWPETRFFNIPITTTNYSHRSSYSAIYSSTMKKICMENFVGGAGSLKDNTTSFVEVVFDEFSDIGVTGIPERMVDDVQTYQNSGDLYGFHLYGLWGIGSDVYQGDIFKFTGELYCSQELRDAGGEVHLYMWTENSIGQWTSSSILRTTGLAPDQWHSLSGYFTIPNDAVNVRMGSQVYHYPSTVKVGLAQCRNVQITKVPREEINRNGAAVGVNGVRMQTLSEVDASGNENPIDKLLSLPVSPTGVASDKKIISHNFAELDYIVSDPVEYTSTNTAEYQFKEWTATRQAEVTKASLSSYGLKAGDTIRMQCQMKRDANAIANNKGAYIVMQFWDANNTYITGINMLDVGTIPNVYSFYKNEGVIPAGAVTFDFGLYRYPSNTNIGTVSAKDVKLSIVR
Physico‐chemical
properties
protein length:530 AA
molecular weight: 58466,91200 Da
isoelectric point:5,17374
aromaticity:0,10943
hydropathy:-0,20189

Domains

Domains [InterPro]
DC_0004
STR
1–530
DC_0004
PS52031
LEC
24–205
PS52031
IPR039477
STR
62–132
IPR039477
XCO36942.1
1 530
Architecture
STR
STR 1-530
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO36942.1
1 530
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,2678
Central domain 74 272 200 0,5822
C-terminal 273 530 257 0,4853
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-272
C-terminal
273-530

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146002
[NCBI] 		3232188 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO36942.1 [NCBI]
Genbank nucleotide accession
PP889458 [NCBI]
CDS location
range 42726 -> 44318
strand +
CDS
ATGGCGAATAACGAATTTATGGCGTTATTCGGCCCTGATAGTTTCACGGCGAATGTGTTTTCAGAAGCAAACGCCGTGAAATATCGCCTTGTTGTCCGTGGAACGAATAACGATTCTGCGGTCAACTCGGTTGAGGTATCTATTAACGGGGCTGATATTATAAACAGACGAACACAAGTTGCTCGCGGAATTAACCTGGCTGTCATTGATGGAACAACTTTAGCATTATTGGATTACAAGGCATTCGATATGTATGGTGATCCTGCTACGAACGGGAATGCGATTAAAGACTACCTGAATTCACTTCCAGCGAACAGAATTGTGTGTTTTTATACTTTCGATGCTATCAAAAGTGATGACAACTTTTTAGCAACAATGAGGAAAATAGGTTCTGTTGCGTGGCCTGAAACTCGGTTCTTTAATATCCCGATCACCACAACCAATTATTCTCACCGTTCATCCTATTCAGCTATCTATTCATCTACGATGAAAAAGATTTGCATGGAAAACTTTGTCGGTGGTGCTGGTAGCTTGAAAGATAACACAACGAGTTTTGTTGAAGTTGTTTTTGATGAATTCAGTGATATCGGGGTAACGGGTATTCCAGAAAGAATGGTTGATGATGTCCAGACATACCAGAACAGCGGGGATCTGTACGGCTTTCATCTTTACGGGTTGTGGGGTATCGGTAGCGATGTTTACCAGGGAGACATCTTCAAGTTTACTGGGGAACTGTATTGCTCACAAGAACTTCGCGATGCTGGCGGTGAAGTGCATCTGTATATGTGGACTGAAAACAGTATTGGACAATGGACAAGTTCATCTATTCTTAGAACAACTGGACTCGCCCCCGATCAGTGGCATTCTCTATCAGGATATTTCACTATCCCAAATGATGCAGTAAACGTTCGTATGGGTTCGCAGGTATATCATTATCCGTCAACCGTTAAAGTCGGGCTGGCACAATGTCGCAACGTACAGATCACGAAAGTACCGCGCGAAGAAATAAACCGTAATGGTGCTGCTGTTGGTGTGAACGGTGTTCGAATGCAGACACTTTCCGAAGTGGACGCAAGCGGAAATGAGAACCCGATTGATAAATTGCTTTCTCTACCCGTTTCGCCTACTGGTGTTGCAAGTGATAAGAAAATCATTTCGCATAACTTTGCTGAACTTGATTATATTGTTTCTGATCCGGTTGAATATACTTCGACAAACACAGCGGAGTACCAGTTCAAAGAATGGACTGCTACACGGCAAGCGGAGGTAACGAAAGCATCACTAAGCAGTTATGGATTAAAAGCGGGTGATACGATCCGTATGCAATGCCAAATGAAACGCGATGCAAACGCAATCGCCAACAATAAAGGCGCATATATCGTAATGCAGTTCTGGGACGCGAATAATACGTATATCACAGGGATCAACATGCTTGATGTTGGCACGATCCCGAACGTATATTCATTCTACAAAAACGAAGGGGTTATTCCTGCTGGTGCTGTTACGTTTGATTTCGGTTTATATCGTTATCCAAGCAACACAAACATCGGCACTGTATCCGCTAAAGATGTTAAACTGTCAATCGTGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
10fb201a52e6383a495c0acaf98ba3726811783c6ff411c33cb4b72355626bb8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6326
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank