Protein

View in Explore
Genbank accession
QJT70953.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,52
Protein sequence
MLNKGIFNFGNSLKVPGDVSVAPPVYDPQRSLRFDSSLSQYLTWLPKVNGNLKQWTYSFWFKRTELTNGFNVPRVFQVSPAYNSYIYVHNGGVLLASSRAGISSVNVSWEYDLVDTTEWYHIVIRADTTQANASDRITLWLNGELLPITTTTTTPALNSDLSFFSTDQENTFGILKNNATTALSQQYDGYLTELAMFDGAADLQIDRFGYFDNLGVWRPSNLRLTIPQEYWVGNSFYLPCTSRTTRTGNSADLVVSTPRGTPVRTKLKPDFLLVKAVDVSALAGIYDRTRGTGKILPLNANPEITNNNTLTSWDDDGYTLGSDFNTASRYASLTLEDNPDFGFDIVTYTGNGLNGRTLAHDLGKLPEMIWIKNRTSTSNWVVWHKDLDDNKTLDLNRNIAQAASTYMGGVTTENFVINAAGNVNANESEYVAYIFTSVDNFCKVGKFTGTGSSSTLSIECGFRPSAYIFKSINHIDSWYTTFSDYYYLIESFNAAVNFNTPPMYETGFHVTTGYGAANPFIFIAWADTTQLQDILESDISDIQFEFVGASDIESVVSLDNPENNLGVLMQKPSSVSAVSPTDGGRVSRLGHRLPDGVIPAVWSKPLTGKVYWEIEYLSDTHPTQNTILLTGLDSRQGKLGHANRIAAYYAGNGHLYTSIPSEVNEAYGDTWTVGDVIGVQCDSDNNTVEYFKNGVSQGIFDYSTYWTGLVYPQGHSASTTDTVRFRIRTTYEEFKYPSSKSADAITLTESDMRYKRADVKKSDIGFTATTYTGFGDYPYSQIISSSRGAVGSFFVEVDGKLVTLYEQHYSGSTYANPVEQFYMNPETRQFEVLPGADFLNMSGALGFMKFIEGSDTYVVIPNYRSDSTHNVTSKVLRWDSSSADDGQFVVHQEIPTSACTDGSILEINGDIFIGLNQFSSEESLTNYAHSLKLMKFNHTSKIFEDIPEIATQGIRGSTMFEVDGKAYIAVSEIEGVNRVRLFEFNPDTHVSTLIQTLTGSTNGRIASTVHEGKAYLITSNQTSDVPVFYTLDTSVNPAQLVTVGDGSTGHIATHHKFLSYSDDKLLVLCARAQAGSSYITNSYLREFTISTGLWATINEYPTRSGYYPDMIEHNGQIYGSIGSYFNGTNYAQYVGYLTVNEDPNTPDDITGEREIYLGGEYDLIWVKSRTGSANSHKVFDTTRGWGKQMSTDLSGPESAQLETNMRGFTKDGFLVGDGSLNANAVNYVAWGWKKDPNLGFDIITYQGDSTGAAHPDRLLTHNCGGEVEFGLVKAYDANIDWYPYVKGVTTDPGHFLQFNTNNALNTSVRPLWAPSKMSPTEFAIGNNDGINQNGTNYIAYLWRSVPGFSKIGTYVGNGNADGPFIDCGFKPAFVLIKCIDSAQNWYLTDSARSPYNNITNRLIPDSSNPEATVATDSITYLSNGFQISGIGNINNIASQKFLYMAFAENPFEHTRAR
Physico‐chemical
properties
protein length:1457 AA
molecular weight: 161189,71690 Da
isoelectric point:4,92421
aromaticity:0,12286
hydropathy:-0,31414

Domains

Domains [InterPro]
IPR013320
STR
9–200
IPR013320 IPR055906 DC_1713 IPR055906
PF13385
LEC
40–200
PF13385 IPR001870
IPR043136
STR
581–767
IPR043136
IPR013320
STR
607–712
IPR013320
IPR003877
STR
609–699
IPR003877
QJT70953.1
1 1457
Architecture
STR
STR
STR
STR
STR 9-200 | STR 265-479 | STR 494-767 | STR 1156-1450 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJT70953.1
1 1457
Domain Start End Length (AA) Confidence
N-terminal 1 25 25 0,8285
Central domain 26 224 200 0,2089
C-terminal 225 1457 1232 0,6104
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-25
Central
26-224
C-terminal
225-1457

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VcorM_GR7B
[NCBI] 		2711165 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJT70953.1 [NCBI]
Genbank nucleotide accession
MT366760 [NCBI]
CDS location
range 139418 -> 143791
strand +
CDS
ATGCTTAACAAAGGCATATTCAACTTCGGTAACTCACTGAAAGTTCCTGGTGACGTATCCGTAGCACCTCCGGTTTACGACCCTCAAAGAAGTTTACGGTTTGACTCATCACTAAGTCAATACCTAACATGGTTACCAAAAGTAAATGGTAACCTAAAGCAATGGACATACTCTTTCTGGTTCAAGAGAACAGAATTAACTAACGGATTTAACGTTCCCCGCGTTTTCCAAGTATCACCTGCCTATAACAGTTATATCTATGTACATAATGGTGGCGTACTCTTGGCTTCTAGCCGCGCAGGTATATCTAGTGTAAATGTCTCATGGGAATATGATCTAGTAGATACTACAGAGTGGTATCACATCGTTATCAGGGCTGATACCACTCAAGCGAACGCCTCCGATAGAATTACCCTGTGGCTAAATGGTGAATTGTTGCCTATAACAACAACCACCACAACACCCGCATTAAACTCCGATTTGAGTTTCTTCTCTACAGACCAAGAAAATACGTTTGGTATACTCAAGAATAATGCTACTACTGCACTATCGCAACAATATGATGGATACCTTACTGAACTAGCTATGTTCGACGGAGCTGCTGACCTTCAGATAGACAGGTTTGGTTACTTTGACAACTTGGGTGTTTGGCGTCCTTCAAATCTACGACTAACAATACCACAAGAATACTGGGTAGGTAACTCTTTCTACTTACCGTGTACATCACGTACAACCAGAACTGGTAACTCCGCTGACTTAGTTGTCTCTACCCCACGAGGCACACCCGTACGTACTAAACTGAAACCTGACTTCCTTTTAGTTAAAGCAGTTGATGTATCAGCATTAGCAGGTATTTATGACCGCACACGTGGTACAGGTAAAATACTGCCATTAAACGCTAATCCTGAAATTACTAACAACAACACACTAACCTCATGGGACGACGACGGGTACACACTAGGTTCAGATTTCAACACTGCTTCCAGATATGCATCCCTAACACTGGAAGATAACCCTGACTTCGGTTTCGACATTGTAACCTACACGGGTAATGGTCTTAATGGTCGTACCCTAGCCCACGACCTTGGCAAACTGCCAGAAATGATATGGATTAAGAATCGAACTTCCACATCCAACTGGGTTGTTTGGCACAAAGATCTCGATGACAACAAGACATTAGACCTGAATAGAAATATTGCGCAAGCAGCCTCAACCTACATGGGTGGCGTAACTACAGAAAACTTCGTGATAAACGCTGCGGGTAACGTTAATGCAAATGAATCTGAATACGTTGCGTACATCTTCACGAGTGTTGATAACTTCTGCAAAGTAGGTAAATTCACTGGTACTGGTTCTTCTAGTACGTTATCTATTGAGTGTGGTTTCAGACCATCAGCGTATATATTCAAATCAATAAACCATATAGACAGTTGGTACACCACCTTCAGTGATTATTACTACCTGATTGAATCATTCAATGCTGCCGTTAACTTTAACACACCTCCTATGTATGAAACAGGGTTCCACGTAACAACAGGTTATGGTGCTGCCAACCCATTTATCTTTATTGCATGGGCGGACACAACACAACTTCAAGACATACTTGAGTCAGATATTTCAGACATTCAGTTTGAATTCGTAGGTGCATCCGATATCGAGAGTGTTGTATCCCTCGATAATCCCGAGAACAATCTTGGGGTTCTAATGCAAAAACCGTCCTCAGTTAGTGCTGTATCACCTACTGACGGTGGTCGGGTATCTCGCTTAGGTCACAGACTACCCGACGGTGTAATACCTGCCGTATGGTCAAAACCACTAACTGGCAAAGTATACTGGGAAATAGAATACCTTTCCGATACTCATCCAACTCAGAACACCATTCTGCTTACGGGTCTAGACTCTAGGCAAGGTAAATTAGGACATGCTAACCGCATAGCTGCCTACTATGCAGGTAATGGTCACCTCTACACGTCGATACCCTCTGAAGTTAATGAAGCTTACGGTGACACTTGGACAGTAGGTGATGTGATTGGTGTTCAATGTGACTCGGATAACAACACTGTCGAATACTTCAAAAATGGTGTTAGTCAGGGTATCTTTGATTATAGTACATATTGGACAGGGTTAGTATACCCACAGGGTCACTCTGCATCAACGACGGATACCGTACGTTTCAGAATACGTACTACCTATGAAGAATTCAAATATCCGTCAAGTAAGAGTGCTGACGCAATAACGTTAACTGAATCCGATATGCGCTATAAAAGAGCCGACGTTAAAAAATCAGATATAGGCTTCACTGCTACTACTTACACAGGTTTCGGTGATTATCCTTATTCACAAATTATTAGTTCTTCTCGTGGTGCTGTGGGTTCTTTCTTCGTTGAAGTAGACGGTAAACTAGTTACACTCTATGAACAACATTACAGTGGTAGTACCTACGCAAACCCTGTTGAACAGTTCTATATGAACCCCGAAACACGTCAATTCGAAGTACTACCAGGTGCTGACTTTTTAAATATGAGTGGTGCTCTAGGATTCATGAAGTTCATCGAAGGTTCAGACACTTACGTAGTTATCCCTAACTACCGAAGTGACTCTACTCACAATGTAACTTCAAAAGTACTACGTTGGGACAGTTCTTCCGCAGATGACGGTCAATTCGTAGTACATCAGGAGATACCTACTTCCGCCTGTACTGACGGTTCTATCTTAGAGATAAATGGTGACATCTTCATTGGTCTAAACCAATTCTCAAGCGAGGAATCCCTAACTAACTACGCACACTCACTGAAACTGATGAAGTTCAACCACACTTCTAAGATATTCGAAGATATACCAGAGATAGCTACTCAAGGTATTCGTGGTAGTACAATGTTTGAGGTTGACGGTAAAGCCTACATCGCTGTATCTGAGATTGAAGGTGTAAACCGTGTTAGGTTGTTTGAGTTTAACCCAGATACCCATGTGTCTACTCTAATTCAAACTCTAACTGGTTCTACTAATGGTCGCATTGCTTCTACCGTTCATGAAGGTAAAGCCTACCTGATTACCTCAAACCAGACCAGTGACGTACCTGTTTTCTACACGCTAGACACATCAGTTAACCCTGCTCAGTTGGTAACCGTGGGCGATGGTAGTACAGGACACATCGCTACACACCATAAATTCCTGTCGTATTCCGACGACAAATTGTTGGTACTTTGTGCTCGTGCTCAGGCTGGTAGTAGCTACATTACTAACTCATACCTACGTGAGTTTACCATATCAACAGGACTATGGGCTACGATAAATGAATACCCTACTCGATCTGGATATTACCCAGATATGATTGAACACAATGGTCAGATTTATGGTTCAATTGGTTCCTACTTCAATGGTACTAACTACGCTCAATATGTTGGATACCTCACGGTTAACGAAGATCCAAATACCCCAGATGACATAACGGGTGAGCGCGAAATATACCTAGGTGGTGAATATGACCTTATATGGGTTAAGTCAAGGACTGGCTCAGCTAATTCCCACAAGGTATTTGATACTACCCGTGGTTGGGGTAAACAGATGTCAACTGATTTATCAGGACCTGAATCAGCTCAATTAGAGACTAACATGCGTGGGTTCACGAAGGACGGGTTCCTAGTAGGTGATGGTTCCTTGAATGCCAATGCAGTAAATTACGTTGCTTGGGGTTGGAAGAAAGATCCTAACCTTGGCTTCGATATTATAACATACCAAGGTGATTCAACGGGTGCTGCTCATCCAGACAGACTACTAACCCACAATTGTGGTGGTGAGGTTGAATTCGGTCTGGTTAAAGCATATGACGCTAACATAGATTGGTATCCCTATGTTAAGGGTGTAACAACTGACCCTGGTCACTTCCTACAGTTTAACACTAATAACGCACTTAATACATCTGTTCGTCCATTGTGGGCACCATCTAAAATGTCACCAACTGAATTCGCCATAGGTAACAACGATGGTATCAACCAGAACGGTACTAACTATATAGCATACCTATGGCGTTCAGTTCCAGGGTTCAGTAAGATAGGTACATATGTAGGTAACGGTAATGCGGACGGTCCTTTCATCGACTGTGGCTTTAAACCTGCATTTGTTCTTATAAAATGTATAGATAGTGCCCAGAACTGGTATTTGACAGACAGTGCAAGATCACCATACAATAACATAACTAATCGACTAATCCCCGATTCTAGTAATCCTGAGGCTACTGTAGCCACTGATTCCATTACTTACTTATCTAATGGTTTCCAGATATCTGGTATTGGTAATATTAATAACATTGCTAGTCAGAAGTTCCTGTATATGGCATTTGCTGAGAATCCGTTCGAACATACAAGAGCTCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
285556ab0d1ff4a04abc6b8ee6ee9fea71d3fe7c524a612b2d2338aee9fbaede
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6145
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing of Vibrio coralliilyticus phages from Hawaiian seawater Richards,G.P. 2017-10-12 — GenBank