Protein

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Genbank accession
AUR88498.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSCSEFPTIQTAKTFKLDAETQNEVVTSDNDRTSPASDGKTKLTLKGIENLAAEQRDQFNETFQSQFAYKRIGNVSDFAGQQLPEADKLNAYQYPDDSGEWYGPVQGQGFPITIPVDPSVDSGWAVCTSASHDYVKRNTEKTVGGAQGGSELTPLIIGDTVNGASFIWLSGGDFPVSTYFPIMKADRSNVVSGEITSLNLSSRPYSAVIGGDTIYLLDVTEYNKPYISLPITAMWCNGDDVFDNYQCLNQIVRYIGGDWFVPAGVYFSSGTLNIKRVIRLTGVGGVDAASYPSKIRFATGVVGLFQHRTDTDADSIGVPFISGAEVGGADGSVFDSLHIYGAGSKLGVNIGAHGVWRKSRGMIRNCQISNFEGDGVHNRGSGTSSDPIVRGNVNVSKCENVRSVDNSGSGFYFSGTGCNAGSTVSCNATDNGEYGMYEGSFLGNYHFGGHYDGNSLGAYICDNANNQSLWVGTYSEPGTPQADLSIGRSMSIGGLQHSGIGDGVNGPYIGSNSGNIQSNRGFVSDYSDGGNRIIVQTGGDPSAGEIIKAENKTNGDTNAWRLQWAGASSAELVFRYANLGSNSAYLITGPNTTRSFGRGSPSPYSFQTQRLFVGDDGNSRNVTCLNGAPTSGEWAKGDIIFIRDAVSSGALANQCTTSGIAGVDAVFTEKG
Physico‐chemical
properties
protein length:671 AA
molecular weight: 71104,22610 Da
isoelectric point:4,85231
aromaticity:0,09836
hydropathy:-0,32295

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR88498.1
1 671
Domain Start End Length (AA) Confidence
N-terminal 1 244 244 0,9938
Central domain 245 519 276 0,9789
C-terminal 520 671 151 0,9138
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-244
Central
245-519
C-terminal
520-671

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.115.A._10N.222.49.B11
[NCBI] 		1881196 No lineage information
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR88498.1 [NCBI]
Genbank nucleotide accession
MG592488 [NCBI]
CDS location
range 17671 -> 19686
strand +
CDS
ATGAGTTGTTCAGAATTCCCAACAATACAGACGGCAAAGACTTTCAAGCTCGATGCTGAAACACAAAATGAGGTCGTTACATCTGATAATGATCGCACATCACCAGCTAGTGACGGCAAGACAAAGTTAACTTTAAAAGGAATTGAAAATTTAGCGGCTGAGCAGCGTGATCAATTTAATGAAACATTCCAGTCGCAGTTTGCATACAAGCGAATAGGCAATGTTTCTGATTTTGCAGGACAGCAATTGCCAGAGGCAGACAAACTAAACGCATACCAATACCCTGATGATTCTGGTGAATGGTATGGACCAGTCCAGGGGCAAGGATTCCCAATAACCATTCCTGTGGATCCATCAGTTGATTCTGGTTGGGCGGTGTGCACGTCTGCTTCTCATGACTACGTGAAGCGCAATACAGAAAAGACGGTAGGTGGTGCTCAGGGCGGCAGCGAGTTAACACCGCTAATCATTGGTGATACTGTTAATGGTGCGTCATTCATTTGGTTGTCTGGTGGTGATTTTCCAGTATCTACATACTTTCCAATTATGAAGGCTGACAGATCTAATGTTGTATCTGGTGAGATCACAAGTTTAAATCTATCTTCGAGACCGTACTCAGCGGTTATCGGTGGAGATACAATCTACTTACTCGATGTTACTGAGTACAATAAGCCATACATATCACTGCCAATCACAGCAATGTGGTGCAATGGTGATGACGTTTTTGATAACTATCAGTGCTTAAATCAGATTGTAAGATATATTGGCGGTGACTGGTTTGTCCCTGCTGGTGTTTACTTTTCATCTGGCACGTTAAACATAAAAAGAGTAATTAGATTGACTGGTGTTGGTGGTGTAGATGCTGCTAGTTACCCGTCAAAGATAAGGTTCGCCACTGGTGTTGTTGGCTTGTTCCAGCATAGGACAGATACTGATGCCGATTCAATCGGTGTTCCTTTTATTTCTGGCGCAGAGGTAGGTGGTGCTGATGGATCAGTTTTTGATAGCCTTCATATTTATGGCGCAGGAAGTAAGTTGGGGGTAAATATTGGTGCTCACGGTGTCTGGAGGAAATCGAGAGGGATGATTAGAAATTGCCAGATATCTAACTTTGAGGGCGACGGGGTACACAACAGAGGCTCCGGGACATCTTCAGACCCGATAGTAAGGGGTAATGTGAATGTTTCAAAGTGCGAGAATGTAAGGAGTGTGGATAACTCTGGTAGTGGGTTTTACTTTTCTGGGACTGGCTGCAATGCTGGCTCAACAGTGTCATGCAATGCAACTGACAATGGAGAGTACGGGATGTACGAGGGTTCATTTCTAGGGAATTACCATTTTGGCGGGCATTATGATGGTAATAGCCTTGGTGCGTACATTTGCGACAATGCCAACAATCAATCATTGTGGGTTGGAACTTATAGTGAGCCAGGCACACCTCAAGCAGATCTGTCAATTGGAAGATCAATGTCAATTGGTGGACTTCAACACTCAGGTATTGGTGACGGGGTTAACGGGCCATATATAGGATCAAATAGTGGCAACATACAATCAAACAGGGGTTTTGTTAGTGACTATTCTGACGGTGGCAACAGAATTATTGTACAAACAGGTGGAGATCCTAGTGCTGGCGAGATAATAAAGGCAGAAAACAAAACAAACGGAGACACTAACGCGTGGCGATTGCAATGGGCTGGCGCAAGTTCTGCTGAGTTGGTGTTTAGATATGCAAACCTAGGTTCAAACTCTGCCTATCTGATAACAGGCCCGAACACAACAAGGTCATTCGGAAGGGGTTCCCCTTCACCATATAGCTTCCAGACACAAAGACTATTTGTTGGAGATGACGGCAACTCAAGGAATGTAACATGCCTAAATGGCGCCCCGACTAGCGGAGAATGGGCGAAAGGTGATATTATATTCATTAGAGATGCAGTATCTAGCGGAGCACTAGCAAACCAGTGCACCACGTCTGGAATAGCTGGTGTTGATGCGGTTTTTACTGAGAAGGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ffb96cb1bf1ccd320b34b18c7dd98406c084c01b6f88bd13e952d5173724d324
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6500
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank