Protein

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Genbank accession
WYA84506.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,62
Protein sequence
MAAMTPQQSVRAVYKSEQEVNSTQNTNNSASTVKGDNGFCILASVYNSSSDQYIQNFMAITFDSAPEVGVTRSADITSFPVESGSTVSDNVKINNNTFKLTGVITETPVRLMRDQLYSAGVNGTRISQAIEYLDQIFDARQPIVLLTEHRTFENVILKGYTYEYRSEFAMQFNLELEQIRLVSTATTNAIAVKTAPNKSTGGEVKSKAPTGGAKVTNPINQNAARDTNTPSNNGG
Physico‐chemical
properties
protein length:235 AA
molecular weight: 25528,05280 Da
isoelectric point:5,53046
aromaticity:0,07234
hydropathy:-0,40170

Domains

Domains [InterPro]
DC_0628
STR
42–235
DC_0628
IPR048494
ATT
62–188
IPR048494
WYA84506.1
1 235
Architecture
STR
ATT
STR
STR 42-61 | ATT 62-188 | STR 189-235
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYA84506.1
1 235
Domain Start End Length (AA) Confidence
N-terminal 1 127 127 0,9379
Central domain 128 224 98 0,0418
C-terminal 225 235 10 0,9430
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-127
Central
128-224
C-terminal
225-235

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PsgM04F
[NCBI] 		3088886 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. garcae
[NCBI] 		251653 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas coronafaciens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYA84506.1 [NCBI]
Genbank nucleotide accession
OR584014.1 [NCBI]
CDS location
range 136921 -> 137628
strand +
CDS
ATGGCAGCAATGACTCCACAACAGTCGGTAAGAGCCGTCTACAAATCCGAGCAAGAGGTGAACTCAACACAAAATACGAATAACTCCGCCTCCACGGTGAAAGGTGATAACGGTTTTTGTATCTTAGCCAGTGTTTACAATAGCTCAAGTGATCAATACATACAAAACTTTATGGCGATTACTTTCGACTCCGCACCGGAAGTTGGGGTAACTCGTTCAGCCGATATCACAAGCTTCCCTGTTGAATCAGGTAGTACAGTTAGTGATAACGTAAAGATAAACAATAACACTTTTAAACTGACGGGTGTGATTACAGAAACGCCTGTTCGTCTGATGCGTGATCAGCTTTACAGTGCAGGGGTTAATGGAACACGTATTTCCCAAGCAATCGAGTACCTTGATCAGATTTTTGATGCTCGTCAACCGATAGTTCTATTAACAGAACACCGTACTTTCGAGAACGTGATTCTGAAAGGTTACACTTACGAGTATCGTTCAGAATTCGCCATGCAATTTAATCTGGAACTGGAGCAGATTCGTTTGGTCAGCACTGCAACAACTAACGCGATAGCTGTGAAGACTGCCCCGAACAAATCTACTGGTGGCGAGGTTAAGAGCAAGGCTCCAACTGGTGGTGCTAAAGTCACTAACCCAATTAACCAAAATGCTGCAAGGGATACCAACACACCGTCGAATAACGGAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
29573e6c3c0a237103140a5c7d91330496bd60b069ed9ed0a319307b758ce5c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7216
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50