Protein

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Genbank accession
CAB4173990.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
TF
Evidence Phold
Probability 1,00
Protein sequence
MAINFPTSPALNDVYTFGGRSWEYNGAAWVNITTTLGPTGTQGLTGIQGTTGAQGTQGLQGTTGIQGLTGIQGTDGIQGTQGVQGTTGTQGLTGTQGLTGIQGIQGVQGILGTQGTSATVLNTLFTSPSEFTNIVPAAPTATNNIYINTSQDWLFTTNTANNFAPNILGDVSTSLNTLMAVGDTKVVNIRVSNGATAYYITAITIDGNSQTVKWQGGTAPTAGNISSSDVYSFAITKTASATFTVLGSQTKFA
Physico‐chemical
properties
protein length:253 AA
molecular weight: 25753,10480 Da
isoelectric point:4,47206
aromaticity:0,07510
hydropathy:-0,02688

Domains

Domains [InterPro]
IPR050149
37–115
IPR050149
IPR008160
37–91
IPR008160
CAB4173990.1
1 253
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4173990.1 [NCBI]
Genbank nucleotide accession
LR796920 [NCBI]
CDS location
range 8439 -> 9200
strand +
CDS
ATGGCTATTAACTTCCCTACCTCCCCCGCGCTTAACGACGTGTACACATTCGGCGGGCGCTCATGGGAATACAACGGGGCAGCCTGGGTAAATATAACTACTACTTTAGGGCCAACTGGAACTCAAGGCTTAACTGGCATCCAAGGTACAACTGGAGCACAAGGCACACAAGGACTTCAAGGTACAACCGGTATTCAAGGATTAACTGGCATCCAAGGCACCGACGGAATTCAAGGCACTCAAGGGGTTCAAGGTACAACAGGAACTCAAGGCTTGACTGGTACCCAGGGCTTAACTGGAATACAGGGTATTCAAGGCGTGCAAGGGATTCTTGGTACACAGGGAACTAGTGCTACCGTACTAAACACGCTCTTTACATCACCTTCGGAGTTCACTAACATAGTCCCAGCCGCCCCGACCGCAACAAACAACATTTATATAAACACCTCTCAGGATTGGCTGTTTACTACTAATACCGCAAACAACTTTGCCCCTAACATCCTCGGGGATGTCTCTACCTCTTTAAATACATTGATGGCAGTAGGTGATACAAAGGTTGTAAATATAAGAGTATCTAACGGCGCGACAGCATATTACATTACAGCAATAACGATTGACGGTAACTCTCAGACAGTTAAGTGGCAGGGAGGAACCGCCCCTACCGCAGGAAACATATCGTCTTCGGATGTGTACTCTTTTGCCATAACTAAGACGGCTTCTGCAACGTTTACTGTCTTAGGGTCCCAGACAAAGTTCGCGTAA

Tertiary structure

PDB ID
a7cd57b92d3f3df6dd6ea1d3aa747d82538d6b48f312385b4720fd1be62335bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6784
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50