Protein

View in Explore
Genbank accession
APD20657.1 [GenBank]
Protein name
tail fibers protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALTDLVRAQYPVLGLDYVDVRDCGAKGDGVTDDCLAIQTAIREAYAKGITRVFVPGTRSFYRCTYPVFLLSGIELFGVGPASRIVFENPVFSKGRGAIVIGSSYEINRDQVFAAYDSGVWAGKSTANTSYVNPAQKQYIRDNPSFIECTGACVHDLRLDAVYIAPHTDGGYGVNFVNSQDCQAYNISGSGWTQLIGMGSDTPPETPSNHRCKAWNLEVVEPNQTRTYYSIGFISNSTNCSIVGAVQHKPMKDGTPNGSAVAFNLCEDCEVLDITVHNLGRTQSSEGVLLNNLVGCRAENIIIKGTPTSKVISAVSHYYTDASFNIADRPNVLRNITAVNCDQAVSLRGKYVIVDSVSPYNCGYDLYFGNNNATNNQVMFEPKSIRFGGSNTQAWFLQNNTVKGWQRRYHHLRPAVLLLNDKGDTKSWNNNKLVSTKLDVDLQFQHSLGEEFKAIDDVRCFLRFNNAADAAHLKGSTVQMSLRQMLAFDGNISEVPYTALTNTRVAASGMGDTSLVASVTGGTGLVRMDDATNGLAYSWTLDLSMTNNTDFNYMKELRVAGYK
Physico‐chemical
properties
protein length:563 AA
molecular weight: 61655,56970 Da
isoelectric point:6,22105
aromaticity:0,09591
hydropathy:-0,21670

Domains

Domains [InterPro]
IPR012334
15–294
IPR012334
IPR011050
15–405
IPR011050
IPR024535
19–94
IPR024535
APD20657.1
1 563
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KPV811
[NCBI] 		1913574 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD20657.1 [NCBI]
Genbank nucleotide accession
KY000081.1 [NCBI]
CDS location
range 416 -> 2107
strand -
CDS
ATGGCACTGACAGATTTAGTAAGAGCACAATATCCCGTACTGGGTTTAGATTACGTGGACGTACGGGATTGTGGCGCAAAGGGTGACGGGGTAACTGATGACTGCTTAGCAATCCAAACAGCAATTAGGGAGGCTTATGCCAAGGGCATTACCCGGGTATTCGTTCCTGGTACACGCTCATTTTATCGGTGCACCTACCCCGTGTTCCTGCTGAGCGGTATTGAGTTATTCGGGGTTGGTCCTGCCTCCAGAATTGTTTTTGAAAACCCCGTGTTTAGTAAAGGGCGTGGGGCTATAGTGATAGGCAGTTCCTACGAAATTAACCGGGACCAGGTATTTGCTGCCTATGATAGCGGTGTGTGGGCCGGTAAAAGTACCGCCAATACCAGTTACGTTAATCCAGCACAGAAGCAGTACATCCGAGACAATCCGAGCTTTATTGAGTGTACTGGTGCGTGTGTACACGACCTACGACTGGATGCAGTTTATATTGCCCCACATACAGATGGAGGTTATGGTGTTAACTTCGTAAACTCTCAAGATTGTCAAGCTTATAATATCTCGGGATCTGGTTGGACGCAGCTTATTGGTATGGGTTCTGATACACCGCCTGAAACCCCGTCTAACCACCGGTGTAAAGCCTGGAACCTGGAGGTGGTTGAGCCTAACCAGACCAGGACCTACTATAGTATCGGCTTCATCAGCAACAGTACTAACTGTAGTATTGTTGGAGCAGTACAGCATAAGCCTATGAAGGATGGTACACCTAATGGTAGCGCCGTGGCATTTAATCTGTGCGAAGACTGTGAGGTGCTTGATATTACAGTACACAACCTGGGGCGCACCCAGTCCTCTGAGGGAGTACTGCTAAATAACCTGGTAGGGTGCAGGGCTGAGAATATCATTATCAAGGGTACTCCTACCTCCAAAGTAATTAGTGCGGTATCTCACTATTATACAGATGCCAGCTTTAATATCGCGGACCGGCCGAACGTGCTCCGCAATATTACAGCGGTTAACTGCGACCAAGCAGTATCGTTGCGAGGTAAGTACGTCATTGTTGATAGTGTAAGCCCATATAACTGTGGTTATGACCTCTACTTTGGTAACAACAACGCAACCAACAACCAGGTGATGTTTGAGCCTAAAAGCATTCGCTTTGGTGGTTCTAATACGCAAGCCTGGTTCTTACAGAATAACACTGTAAAAGGCTGGCAGAGACGTTACCACCACCTGCGCCCGGCCGTGTTGCTACTGAATGATAAGGGGGACACGAAGAGTTGGAACAACAACAAGTTGGTATCCACTAAATTGGATGTGGACTTGCAGTTCCAGCATAGCTTGGGGGAAGAGTTTAAAGCTATCGACGATGTACGCTGCTTCCTGCGATTCAACAACGCAGCGGACGCCGCACATCTCAAAGGTAGCACTGTACAGATGTCTCTTCGGCAGATGCTGGCATTTGATGGTAATATCTCGGAGGTTCCATATACCGCCTTGACCAATACTAGGGTGGCGGCGTCTGGTATGGGTGACACGAGTCTGGTTGCTAGTGTAACCGGAGGTACAGGGTTGGTGCGGATGGATGATGCTACCAATGGTTTGGCTTATAGTTGGACCCTTGACTTGAGTATGACCAACAACACTGACTTTAACTATATGAAAGAACTGAGAGTAGCGGGGTACAAATAA

Tertiary structure

PDB ID
af3e14bfb51cbacf67935b9f1c3da93434170a4e19ad666ec3e61459607e75ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for prophylaxis and treatment of hospital infections (variants), strains of bacteriophages, used for obtaining thereof Aleshkin,A.V., Volozhantsev,N.V., Verevkin,V.V., Krasilnikova,V.M., Myakinina,V.P., Popova,A.V. and Svetoch,E.A. 2016-10 — GenBank