Protein

View in Explore
Genbank accession
WCD55579.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIKTCAVSAKITAPDGGPVANAIIVAELSSKVMQDGVMVPDRVVAHTDDQGSATLNLWSNASTTNPITFYMIIISTPQGTVETFYISVPDAPTANLDDLERLSVPDEEKDKVARLVAALADIESKTKADVAQAEAALQAVKKEVADFVVSIKQPESWGGTIANGQAMYPIPGATSTNNNMYDVVISGVPQKPDDDFAVHIDQADASNSKIELIGNLPVGREWWAVTRPSFNNKS
Physico‐chemical
properties
protein length:235 AA
molecular weight: 25012,88500 Da
isoelectric point:4,51281
aromaticity:0,05532
hydropathy:-0,10128

Domains

Domains [InterPro]
DC_0617
ATT
2–65
DC_0617 Coil
WCD55579.1
1 235
Architecture
ATT
ATT 2-65 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Fayden
[NCBI] 		3017795 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD55579.1 [NCBI]
Genbank nucleotide accession
OQ079153.1 [NCBI]
CDS location
range 39262 -> 39969
strand -
CDS
ATGGCAATTAAAACATGCGCAGTATCAGCAAAAATAACAGCACCGGACGGAGGTCCGGTTGCTAATGCAATTATCGTTGCGGAGCTTAGCAGTAAAGTAATGCAGGATGGCGTAATGGTCCCAGATAGAGTGGTCGCTCATACTGACGATCAGGGTAGTGCAACTCTAAATTTATGGTCTAACGCATCAACGACCAACCCAATAACGTTTTACATGATAATCATCAGTACACCTCAGGGTACGGTAGAAACGTTTTATATATCCGTTCCGGACGCGCCAACAGCCAACCTAGACGATTTAGAGCGCCTATCTGTTCCGGATGAAGAAAAAGATAAGGTTGCGAGACTTGTTGCTGCGCTTGCTGATATTGAGAGTAAAACCAAGGCAGATGTAGCACAGGCAGAAGCGGCACTACAGGCAGTAAAAAAAGAGGTCGCCGACTTTGTTGTGAGTATAAAGCAACCAGAATCTTGGGGTGGTACAATAGCCAACGGACAGGCAATGTACCCAATACCTGGTGCAACGTCGACAAACAACAATATGTACGACGTAGTAATTTCTGGCGTACCTCAAAAGCCAGATGATGATTTTGCGGTCCATATAGATCAGGCGGACGCCAGTAATTCAAAAATTGAATTAATTGGTAATTTGCCAGTCGGTCGGGAGTGGTGGGCAGTAACTCGACCATCCTTCAACAACAAAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
18abc5cba7543079bb7f77f693320bc29665c6c983b157dfd7eb053870616c4d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8761
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50