Protein

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UniProt accession
E3SKD6 [UniProt]
Protein name
YHYH domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARTVPGTGAVIEPIFDEVFGVRAVKVLNGGSGYVPTDPPRLTVTGCGTPDVEALLYPIIDADSGRITHVRVLNRGKGYDPLRLQIVPEQETPNVVTSFDINRLWQAHPNSPTTGTFTISGNDVTDRLRLVSDNHPKPTQHFLTERQPGGSTDVVDRSFDHTVVYRGGKDVPYVGTREFQKNKALGILANGSLLHSPEWGTVGGTPTNFSIDTVKYDYVKNTNVYDAVNDSGVYYYQSSKVVDEFDLTNGVFDWGNIQQYTWNVKVETGNLVVGVTGLDETLGNVEVGRIVDEVGGTGRGEIAKIVRDNQNNITRIYIRALTGDAFVANDLLLGSNGFEFRIDGDPISINPYYIDFGPDAAKFGPFVPGQFYFAPENIQVRANYLIRFNQSDASNQAGIGHPIRFSTTQDGTLNGGTLYYDSTGLSSAPSADYESIYSPLFLMNGDESSRIYFHCAYHRYMGGYAGDEAYMVLNTSAETYTPTNNYYVQDFYQSNSNDPNTIDRSRYIDGHSKVLGVSFDGYPIYGPWGYNSSGAVAREVSSYRLKTTAELSGARPQVNTASTVTYAVTISNGQFQFDGSRPSFLELDRGKTYIFNQNDASNDSQHLLISTTEDGWHGINPVVIGNTANLYTGNGIRYYIDGSEVTYASYLSGFNLATTREIRFTVPVNAPAALYLFAYTTAGHGIRTVQDGYILGDLTEDYIYDSSVGTLDEFNGKFAVTPEYPNGTYAYFMTEDGSGNPTYPYAIGPKMYGTPLFEGQTAPAPVTVFPSGAEGDVVLADNGSVSYIKMTKKGDNFFGPAKARILGGEGTGAIGTPTVQTVTGLALLNGGRSYATPPTLIFEGGGGQGAQGAAEIDTLGKVTSIAITNPGEFYQEPPFILITGGGGIGAKAEATIDQGVITAINITDPGVGYTSVPNVIFTKLVTLKRKTRARQAFNSSNIYLTGLVKSVGANDSEIYVDSTDAFPGSGQIILNYETITYTSKSVGKFGGLTRGVNFNYDQRVILDAGQNDSNGVSTYNFSVGDRVIRRVENANNKIAKVYDWNPATRELLVTFEVDELAFIDGGIPSTEDAIVQFDAGVASSAPSGFQPHTVLSTTGSSIFLLTDPPSTLADSSFQDILPTAAGDGIADLDNTGTDFANQISLDGGIYNSLYGIEETQGGTNTTLFQVGDNVKDGSIPQKFATIVTAGALSDGVEHTALLSIKLDANNANGQNYSVNEVVTGATSGVIGTVVSWDPATSTLVVGSIVPFNTGNVNVGVGGYLYEFSHDSTVVDVIIQNPGTNYTAAPTVAFENIGDIQATGTAVLTTAGDQVASITITNGGYGIKQTVDNTYNLHPTITFTNAGGDSTGANAAAQAILGGEDLVGNGGARYRIKSIDYQATVRS
Physico‐chemical
properties
protein length:1386 AA
molecular weight: 148050,67190 Da
isoelectric point:4,60267
aromaticity:0,10245
hydropathy:-0,20649

Domains

Domains [InterPro]
DC_0146
STR
1–803
DC_0146 DC_0155
IPR025924
STR
511–562
IPR025924 DC_0155
IPR025924
STR
692–736
IPR025924
E3SKD6
1 1386
Architecture
STR
STR
STR 1-1260 | STR 1325-1386
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
E3SKD6
1 1386
Domain Start End Length (AA) Confidence
N-terminal 1 111 111 0,9809
Central domain 112 939 829 0,3838
C-terminal 940 1386 446 0,0863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-111
Central
112-939
C-terminal
940-1386

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SSM5
[NCBI] 		445685 Uroviricota > Caudoviricetes > Pantevenvirales > Glaucusvirus > Glaucusvirus ssm5
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
7b871b578ae5c04dfc0536926f96459cc7dbea517153dbdc90de554cfa05508a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4242
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50