Protein

View in Explore
Genbank accession
QXV74996.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MAALSRVIKTGNGSTTQFVVDFALGYLSPSDITCRVGNEADGSGNPIYRTITFLSETLLQVGGTPAGNGVQVVFERTVEKEDTIVHFSTGDVLDETNLDLSFKQILMVVHEVLDGRFGAFDSDLDMGGFRITNLGDPVDNSDAATKFYVDDRTALGAEQVALATAAAEVASDAAIAAQAAQTAAAGSASAAATSATNAATSAANAATSATSAAASALSAQTLLSGGSAGQFLGKNSNTNFDYAWINLPGGGDMFKSVYDPQGKNADAFSWNNFTDKPTTFPTTVANISDLKSMAKRDLTISSAAPSGGVDGDVWYKI
Physico‐chemical
properties
protein length:317 AA
molecular weight: 32647,60060 Da
isoelectric point:4,33860
aromaticity:0,07886
hydropathy:-0,01956

Domains

Domains [InterPro]
IPR005604
6–115
IPR005604
QXV74996.1
1 317
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph27
[NCBI] 		2836137 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74996.1 [NCBI]
Genbank nucleotide accession
MW980074.1 [NCBI]
CDS location
range 37542 -> 38495
strand +
CDS
ATGGCAGCCCTTTCAAGGGTTATCAAGACCGGCAACGGCAGCACGACACAGTTCGTTGTTGACTTCGCGCTCGGCTATCTAAGCCCCTCGGACATCACTTGTCGCGTAGGCAACGAGGCTGACGGGTCTGGAAACCCAATTTACCGCACTATCACATTCCTGTCGGAAACACTGCTGCAAGTCGGCGGTACTCCCGCTGGTAACGGGGTGCAGGTAGTCTTTGAGCGCACCGTCGAGAAAGAGGACACGATTGTTCACTTCTCTACTGGCGACGTTCTGGACGAGACTAACCTCGATCTGTCGTTCAAACAGATTTTGATGGTCGTGCATGAGGTTCTGGACGGGCGCTTTGGTGCGTTCGACAGTGACCTGGACATGGGTGGCTTCCGTATCACCAACTTGGGCGATCCGGTAGACAACAGTGATGCTGCGACCAAGTTCTATGTAGACGACCGTACTGCACTCGGCGCTGAACAGGTGGCTCTTGCTACTGCTGCGGCTGAGGTTGCCAGTGATGCGGCTATTGCTGCACAGGCTGCACAAACGGCTGCGGCGGGTTCCGCCTCGGCGGCTGCTACCAGCGCCACTAATGCGGCCACCAGTGCGGCAAATGCAGCGACATCAGCTACGAGTGCAGCGGCCAGCGCCCTATCGGCGCAGACCTTGCTGTCCGGTGGCTCTGCTGGTCAGTTCCTCGGCAAGAACTCGAATACGAACTTCGACTACGCCTGGATCAACCTTCCGGGTGGCGGCGATATGTTCAAGTCGGTGTACGACCCGCAGGGCAAGAATGCTGATGCGTTCTCGTGGAACAACTTCACAGACAAGCCAACGACGTTCCCTACGACAGTGGCGAACATCTCAGACCTCAAGTCTATGGCAAAGCGCGACCTCACGATTTCCAGTGCAGCCCCTTCGGGCGGCGTTGACGGAGACGTTTGGTACAAGATTTAA

Tertiary structure

PDB ID
6ddd57a36af716ffd2d57f029f0ba24b56bcac5d9c43fb2c8b97224b570d6cb0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8029
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank