Protein
View in Explore- Genbank accession
- AOZ63904.1 [GenBank]
- Protein name
- tail accessory protein
- RBP type
-
TSP
- Protein sequence
-
MNSSGYLRSFPGIAKRSDVNGVSRGVEYNMAQSAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYIIGSGQVSPIASASIEKILRSYTADELADGVMESLRFDAHELLIIHLPRHVLVYDASSSANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDISSQYDKQQEHLLFTPLFKADNARVFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRKNVGFKLRVITKSPVTLSGAQIRIE
- Physico‐chemical
properties -
protein length: 436 AA molecular weight: 48105,41040 Da isoelectric point: 5,80880 aromaticity: 0,10780 hydropathy: -0,25528
Domains
Domains [InterPro]
IPR021098
STR
1–436
STR
1–436
IPR021098
STR
2–436
STR
2–436
1
436
Architecture
STR 1-436
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
436
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 303 | 303 | 0,8640 |
| Central domain | 304 | 425 | 123 | 0,1862 |
| C-terminal | 426 | 436 | 10 | 0,9586 |
Note: Constraints were applied during segmentation.
Fixed 30 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 30 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-303
1-303
Central
304-425
304-425
C-terminal
426-436
426-436
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Salmonella phage UPF_BP1 [NCBI] |
1912492 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Salmonella enterica subsp. enterica serovar Brandenburg [NCBI] |
149387 | Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AOZ63904.1
[NCBI]
Genbank nucleotide accession
KX776161
[NCBI]
CDS location
range 21073 -> 22383
strand +
strand +
CDS
TTGAATTCATCGGGATATCTTCGCTCATTCCCTGGCATTGCCAAACGCTCTGATGTGAACGGTGTATCTCGCGGCGTCGAGTACAACATGGCGCAGAGTGCTGTTTATCGCGTGTGTGGTGGCAAGCTGTATAAGGGCGAAAGTGAAGTCGGTGACGTCGCCGGAAGTGGTCGCGTATCAATGGCACATGGTCGGACATCACAGGCGGTAGGCGTTAATGGCCAACTGGTCGAGTATCGCTATGATGGCACGGTTAAAACCGTCTCAAACTGGCCTGCAGACAGCGGATTCACGCAGTATGAGTTAGGTTCAGTGCGTGACATTACGCGCTTACGTGGGCGTTATGCGTGGTCAAAAGACGGCACTGATTCATGGTTTATCACTGACCTCGAAGATGAATCGCATCCTGACCGCTACAGCGCACAATATCGCGCAGAGTCGCAGCCTGACGGCATCATCGGCATCGGAACATGGAGAGACTTCATCGTCTGCTTTGGTTCATCGACGATTGAATATTTCTCCCTGACTGGTGCAACCACCGTTGGTGCTGCTTTGTATGTCGCCCAGCCATCGCTGATGGTGCAGAAAGGCATTGCCGGGACCTACTGCAAAACGCCGTTTGCTGACTCGTATGCGTTCATCAGCAATCCGGCAACAGGTGCGCCGTCTGTATACATCATCGGCTCCGGTCAGGTATCACCAATCGCCAGCGCGAGCATTGAGAAAATCCTCCGCTCCTACACTGCTGATGAACTGGCTGATGGTGTGATGGAATCGCTGCGCTTTGATGCTCATGAGTTGCTGATTATCCACCTGCCGCGCCACGTCCTAGTATATGACGCATCTTCAAGTGCCAATGGTCCGCAATGGTGTGTACTGAAAACGGGCCTGTATGACGATGTGTACCGCGCTATCGACTTCATTTACGAAGGCAATCAGATAACGTGCGGCGATAAGCTGGAATCGGTGACAGGGAAATTGCAGTTCGATATCAGCAGCCAGTACGACAAGCAGCAGGAACATCTGCTGTTTACTCCGCTGTTCAAAGCGGATAACGCAAGAGTGTTCGACCTTGAGGTTGAATCTTCAACTGGCGTTGCGCAGTACGCTGACCGCCTTTTTCTCTCTGCAACCACTGACGGCATCAATTACGGGCGTGAGCAGATGATTGAGCAGAATGAACCGTTCGTTTACGACAAGCGTGTTCTGTGGAAGCGAGTAGGGCGCATCAGGAAAAATGTCGGCTTCAAATTGCGCGTTATCACGAAGTCACCTGTCACTCTGTCTGGCGCTCAGATAAGGATTGAGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
0d8a24d097b448d8ab4ea797eb1577ea7b700bed7358ace0942621b2e7e748c2
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50