Protein

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Genbank accession
ARM68253.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MENVLNLNDSNDGNRIKQGDLSHMRYILTDANSDDLNLNDKPAKVYLTDSTGVKYIYDTTVKQSDNVYVCDVVINQIIPAGTYTLEIWVDNRYVFPSDTKTKIQVTESVIGRQIVNVETHNLWDEILEYGVKNGMIKQDSGSDFFIGNQPPTDKNKIWIDTGVSK
Physico‐chemical
properties
protein length:165 AA
molecular weight: 18695,65750 Da
isoelectric point:4,64172
aromaticity:0,08485
hydropathy:-0,50424

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage IME1367_01
[NCBI] 		1965491 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus warneri
[NCBI] 		1292 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM68253.1 [NCBI]
Genbank nucleotide accession
KY653124.1 [NCBI]
CDS location
range 37557 -> 38054
strand +
CDS
ATGGAAAATGTATTAAATTTAAATGATTCAAATGATGGTAATCGCATTAAACAAGGTGACTTATCACACATGAGATACATCTTAACTGACGCTAATAGTGATGATTTAAATCTTAACGATAAACCTGCAAAAGTTTACTTAACTGATTCGACAGGTGTCAAATACATCTACGATACGACAGTTAAGCAATCAGACAATGTCTATGTGTGCGATGTAGTGATCAATCAAATTATACCGGCAGGCACGTATACATTAGAAATATGGGTTGATAATCGCTATGTATTCCCATCTGACACTAAAACGAAGATACAAGTCACTGAAAGTGTTATTGGTCGTCAGATAGTTAATGTAGAAACGCATAATTTATGGGACGAGATTTTAGAATATGGTGTTAAGAACGGCATGATTAAGCAAGACAGTGGTTCTGATTTCTTTATAGGTAATCAACCACCTACTGATAAGAATAAAATTTGGATAGATACGGGAGTGAGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
39a2e5e24a629bd3401b1ba4bf91e2b1cf060476144c71ced91036581ddb124f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8631
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of active prophages from bacterial high-throughput sequencing data Sun,Q., Zhang,X., Xing,S. and Tong,Y.-G. 2018-12-28 — GenBank