Protein

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Genbank accession
WMM95849.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,70
Protein sequence
MGQISSAIPNLIQGVSQQSAALRLSSQAEVQENAFPSLVEGLHKRPPLQYIATMKSTPTTSSFVHLINRDTTERYFVTIDGSNNLKVYDLFGVEKTVNFPDGTTYLNCTDATTAFRAVTVADFTYILNTEVEAQMSSARTPVQNPKGLVAVKQGDYNQRYTIYLNGSIAANITTSATDQLETRTDDIASRLATAINGTGGFTATNDGSTVVITRSDNQEFTLATYDSLGDTGLSSTIGVSQRFDDLPRQAPDGYIVQVQGDQTNDFDDYYVKFEASAGNSGNASEGTWVETVKPNIPYQIDETTMPHLLRRNADGTFTFRKATWGERTAGDENSVADPTFIGQKISDVFFFQNRLGLLAGENVIMSRTSEYYDFFSTTARNLLDTDPVDIAASHTKVSILKHAIPFDRKLLLFSDQTQFILKGADYLSPTNTSITQTTEFEASTASKPASAGNVVYFPATRGGFTSVREYYVIDDTDRSDATDVTAHVSKYVPDNVYDMSASTTENSLVCLSRDEPSSLFIYKWHWAGREKLQSAWFKYTFNGLEVLNAEFIESGLYIVGNKDGKTGIFLIRFDEGREDPDQDYVTRLDFRFYDLEVTTSYDAVADQTTITTPIGLDEAFVVTRGQNHGKIIDVVSTNGTTTVVKGDVTSTEFYIGERYTMIYEFSEATLKENTATGGRVAITGGRLQLKHWLLRYQDTGEFECVVGSRLTNILSNDQTYKFTGRVVGGGQNIIGGTTLTSGEFRFPVLGKSDRVRIIIQSDSHLPCQFLSAEWEGNMHLRSRRMNG
Physico‐chemical
properties
protein length:787 AA
molecular weight: 87061,54240 Da
isoelectric point:4,89181
aromaticity:0,10292
hydropathy:-0,34320

Domains

Domains [InterPro]
IPR058003
TTP
1–785
IPR058003
WMM95849.1
1 787
Architecture
TTP
TTP 1-785 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95849.1
1 787
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9932
Central domain 141 343 204 0,1137
C-terminal 344 787 443 0,2096
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-343
C-terminal
344-787

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-113
[NCBI] 		3072841 Uroviricota > Caudoviricetes > Autographivirales > Oceanidvirus > Oceanidvirus CRP113
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95849.1 [NCBI]
Genbank nucleotide accession
OR420755 [NCBI]
CDS location
range 21312 -> 23675
strand +
CDS
ATGGGACAAATAAGCAGTGCCATCCCAAACCTGATACAAGGTGTTAGTCAACAATCTGCGGCGTTGCGTCTTTCCTCTCAGGCCGAAGTTCAAGAGAATGCGTTCCCATCGTTGGTAGAGGGTTTGCATAAGCGACCACCGCTGCAATACATCGCCACGATGAAGAGTACACCGACTACTTCTAGTTTTGTGCACCTCATAAATCGTGACACAACTGAAAGATATTTTGTTACCATCGACGGTAGCAATAACCTAAAAGTCTATGACCTGTTTGGCGTAGAGAAAACAGTAAACTTTCCAGACGGTACTACCTACCTTAACTGTACAGACGCTACTACAGCATTTCGTGCAGTCACTGTAGCTGACTTTACCTACATTCTAAATACTGAGGTAGAGGCACAGATGTCGTCTGCAAGGACACCTGTACAGAACCCTAAAGGTTTAGTGGCTGTTAAGCAGGGTGATTATAACCAACGGTACACAATTTACCTTAATGGTAGCATTGCTGCTAACATCACTACATCAGCTACAGATCAATTAGAAACTCGTACAGACGATATTGCATCCAGACTTGCTACAGCTATCAACGGTACTGGAGGCTTCACTGCCACTAACGATGGTAGTACGGTTGTAATAACACGATCTGATAACCAAGAGTTTACTCTAGCAACCTACGACAGTTTAGGTGATACAGGTCTTTCATCAACTATTGGCGTTAGTCAACGCTTTGACGATCTACCTCGACAGGCACCTGATGGTTACATTGTTCAAGTACAGGGTGACCAGACAAATGACTTCGATGATTACTATGTAAAATTTGAAGCATCTGCAGGTAACTCAGGGAATGCCTCTGAGGGTACATGGGTCGAAACAGTTAAACCAAACATCCCATATCAAATTGATGAAACTACAATGCCTCACTTGCTGCGTAGGAATGCCGATGGAACCTTCACGTTCCGTAAGGCAACTTGGGGTGAACGCACGGCTGGTGATGAAAACTCAGTTGCTGACCCGACATTCATTGGTCAAAAGATTTCTGATGTGTTCTTCTTTCAGAACCGTCTAGGACTACTGGCGGGTGAGAACGTGATTATGTCACGTACATCAGAGTATTATGATTTCTTCTCAACCACAGCTAGGAACCTGCTAGATACAGACCCAGTAGATATTGCTGCTAGTCATACAAAAGTTTCGATACTTAAACATGCCATTCCTTTCGATAGGAAGCTGTTATTGTTCAGTGACCAGACACAATTTATCTTGAAGGGTGCTGACTATCTATCACCCACGAACACATCGATTACGCAAACTACAGAGTTTGAGGCAAGCACAGCGTCTAAACCTGCTAGTGCTGGTAACGTTGTGTACTTTCCAGCTACCCGTGGTGGTTTCACATCAGTACGTGAATACTACGTTATTGATGATACTGACAGGTCAGACGCGACAGACGTAACTGCACACGTATCTAAGTATGTACCAGACAATGTTTATGACATGAGTGCTAGTACAACAGAGAACAGTCTTGTGTGTCTATCACGCGACGAACCGTCCTCACTATTTATATATAAGTGGCACTGGGCGGGTCGAGAGAAACTGCAATCAGCTTGGTTCAAATATACCTTCAATGGACTAGAGGTACTTAACGCTGAATTTATTGAAAGTGGTTTGTACATCGTAGGTAACAAAGATGGTAAGACAGGTATCTTTCTCATACGATTTGACGAGGGACGTGAAGACCCAGATCAAGACTATGTAACGCGACTAGACTTCCGTTTCTATGATTTGGAAGTAACTACGAGTTACGATGCAGTTGCCGATCAGACAACCATCACGACACCTATAGGACTAGACGAAGCCTTTGTGGTTACTCGTGGACAAAACCACGGTAAAATTATTGATGTAGTATCTACAAACGGGACAACGACTGTTGTTAAAGGTGATGTAACATCTACCGAATTTTATATCGGTGAACGATACACCATGATTTATGAGTTCTCTGAGGCTACGCTAAAAGAGAACACAGCTACTGGTGGTCGTGTTGCGATTACTGGTGGTAGACTACAGCTAAAACATTGGCTGCTACGTTACCAAGACACAGGTGAGTTTGAGTGTGTCGTAGGTTCTAGACTGACAAACATCTTATCAAACGATCAGACTTATAAGTTTACTGGTCGTGTTGTCGGTGGTGGTCAGAACATTATTGGTGGCACCACGTTAACTTCAGGTGAATTTAGATTCCCTGTTCTCGGTAAATCAGACCGAGTTCGTATTATTATACAAAGTGACAGTCACCTTCCTTGTCAGTTCTTATCTGCCGAATGGGAAGGTAACATGCACCTTAGATCAAGACGAATGAATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aefa5d812b9c7e1c780e4b8d44a63dab23978197c454b896319b1f1549deb1bb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3200
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50