Protein

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Genbank accession
AFH14774.1 [GenBank]
Protein name
phage tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MPRLTKISPSMISTQGSNVGDVLKDDGIKYSPNPERVHITGAVKSASYDKETGVFRIVNSDDSEIVVTGLPTSSNIGVGATGPTGPQGAKGDNGRNGKDGRDGPAGCIGPKGDAGPAGPPGGYGGIGPRGPVGATGPQGPQGLPGEKGPIGPTGPAGPTGPSGGAGQIGPTGPQGIIGLTGATGPTGPQGEIGPIGPTGPKGESGTEGATGLQGPPGEPGPAGVGLPGPPGASAIFTNDFWTHENPSVGRYGSIEVGDKTMEIMGTYKSSSSVQDISLTLPFNGKGARRAIAYISFNKFPTELRTTGNYTATVENTIDGDTSCTLKFNGTVPFASLDFNWRVALLSTSPTPDLNAQNGYLDVERPGAGYTAPMTFSIAATAESDETIVTEYETVSDTSVGTMIDAPNTVDIFNRWQRAAGGDYFGTSVTVPLSNDASTLLFDNNRIEVQRNTTNYTMLLSPVSYKKFDYQCVVGSQDNDDDAIGMVVAFARVDGVNHSILAMRNRGGAGGLAPLKNFMLIYVRNNTIVRNLGSADIGTGTGAWRDHTTKIRVVRNGDSVQCYATPFDSTVFDPTPLTVDLSSSPDLAVFRDFCRFGFVAYSQAFAYFDDIDFVQPANPDYVTTYGSVAIAPGDIEAEVAVTINGTDAVPNTGSVMLRIANARNAKIVNAIGTGNF
Physico‐chemical
properties
protein length:675 AA
molecular weight: 69766,62350 Da
isoelectric point:4,76279
aromaticity:0,07407
hydropathy:-0,26178

Domains

Domains [InterPro]
DC_0452
ATT
2–58
DC_0452 IPR050149
DC_1341
STR
121–185
DC_1341 DC_1887
AFH14774.1
1 675
Architecture
ATT
STR
STR
ATT 2-58 | STR 121-185 | STR 230-546 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFH14774.1
1 675
Domain Start End Length (AA) Confidence
N-terminal 1 344 344 0,7043
Central domain 345 543 200 0,5788
C-terminal 544 675 131 0,1949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-344
Central
345-543
C-terminal
544-675

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lu11
[NCBI] 		1161927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFH14774.1 [NCBI]
Genbank nucleotide accession
JQ768459.1 [NCBI]
CDS location
range 193703 -> 195730
strand +
CDS
ATGCCCCGGTTAACTAAAATTTCGCCGTCGATGATTTCCACACAGGGATCGAATGTCGGCGACGTGCTCAAGGATGACGGGATTAAATATTCCCCGAATCCTGAGCGTGTGCATATTACTGGCGCTGTAAAAAGCGCCTCGTATGACAAAGAAACTGGCGTATTTCGTATCGTAAACAGTGACGACTCTGAAATCGTTGTAACTGGTTTGCCTACTTCGTCAAATATTGGGGTTGGCGCTACCGGCCCAACTGGCCCGCAAGGCGCAAAAGGAGATAACGGAAGAAATGGTAAAGATGGGCGCGATGGTCCTGCGGGCTGTATTGGCCCGAAAGGTGATGCAGGCCCTGCTGGTCCTCCCGGTGGTTATGGCGGTATCGGCCCCCGTGGCCCAGTAGGCGCAACAGGTCCGCAAGGCCCGCAAGGTTTACCCGGTGAAAAAGGCCCGATTGGTCCTACCGGGCCTGCTGGCCCTACGGGGCCTAGCGGTGGCGCTGGTCAAATTGGCCCTACCGGTCCACAAGGAATTATTGGTTTAACTGGTGCAACCGGTCCAACTGGCCCGCAAGGCGAAATTGGCCCGATTGGTCCTACTGGTCCAAAAGGTGAAAGCGGAACGGAAGGTGCAACCGGTTTGCAAGGCCCGCCCGGTGAACCCGGTCCTGCTGGCGTTGGTTTGCCCGGTCCGCCCGGAGCATCTGCAATTTTCACCAATGATTTTTGGACGCACGAAAACCCGTCTGTTGGTCGCTACGGTTCCATTGAAGTCGGCGACAAAACAATGGAAATTATGGGCACCTATAAATCCAGTTCGTCGGTGCAGGATATTTCTCTAACACTGCCGTTTAATGGAAAGGGTGCGCGTCGTGCAATTGCGTACATTAGTTTCAACAAATTCCCTACGGAATTGCGCACGACCGGTAACTACACGGCGACCGTTGAAAACACGATAGACGGTGATACTTCCTGTACGTTGAAGTTCAACGGCACGGTTCCTTTTGCGTCCCTTGATTTCAACTGGCGTGTGGCTCTGCTTTCCACTTCGCCTACGCCAGATTTGAATGCGCAAAATGGTTATCTTGATGTTGAGCGTCCGGGCGCCGGATACACCGCGCCTATGACGTTCTCGATTGCAGCCACTGCGGAATCTGATGAAACAATCGTGACTGAATACGAAACTGTTTCTGATACCAGTGTCGGCACCATGATCGATGCACCAAATACCGTGGATATTTTCAACCGCTGGCAGCGTGCGGCGGGTGGTGATTACTTCGGCACTTCGGTAACGGTTCCGCTGTCGAACGATGCTTCCACTTTGCTGTTCGATAATAACCGAATTGAAGTGCAGCGCAATACCACAAACTACACCATGCTGCTGTCGCCCGTTTCTTACAAGAAATTCGATTATCAATGTGTTGTAGGTTCGCAGGACAACGATGACGATGCCATCGGTATGGTTGTCGCGTTTGCCCGCGTGGATGGCGTAAACCATTCCATTCTGGCAATGCGTAACCGTGGTGGCGCGGGTGGCCTCGCTCCGCTGAAAAACTTCATGCTGATTTACGTGCGCAATAACACAATTGTGCGCAACCTCGGCTCGGCGGATATTGGTACGGGTACTGGCGCATGGCGTGACCACACGACGAAAATTCGTGTAGTGCGAAATGGCGATTCCGTGCAGTGCTACGCAACGCCGTTTGATTCGACCGTTTTCGATCCTACGCCGCTGACTGTCGATTTGAGCAGCTCGCCAGACCTCGCCGTCTTCCGCGACTTCTGCCGGTTTGGTTTTGTTGCTTACTCGCAAGCATTTGCCTACTTTGACGATATCGATTTTGTGCAGCCTGCAAATCCTGATTATGTCACTACGTATGGTTCGGTCGCAATTGCGCCGGGCGATATCGAGGCAGAAGTGGCAGTGACCATTAACGGCACCGATGCAGTTCCGAACACTGGTTCTGTAATGCTGCGAATTGCAAACGCAAGAAATGCCAAGATTGTTAACGCAATCGGCACCGGCAATTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0c79a86e766cc78874462de5ccece9804cd7e36ffa73b01bd8a33459204cb957
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5435
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50