Protein

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Genbank accession
AFH14774.1 [GenBank]
Protein name
phage tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,57
TF
Evidence Phold
Probability 1,00
Protein sequence
MPRLTKISPSMISTQGSNVGDVLKDDGIKYSPNPERVHITGAVKSASYDKETGVFRIVNSDDSEIVVTGLPTSSNIGVGATGPTGPQGAKGDNGRNGKDGRDGPAGCIGPKGDAGPAGPPGGYGGIGPRGPVGATGPQGPQGLPGEKGPIGPTGPAGPTGPSGGAGQIGPTGPQGIIGLTGATGPTGPQGEIGPIGPTGPKGESGTEGATGLQGPPGEPGPAGVGLPGPPGASAIFTNDFWTHENPSVGRYGSIEVGDKTMEIMGTYKSSSSVQDISLTLPFNGKGARRAIAYISFNKFPTELRTTGNYTATVENTIDGDTSCTLKFNGTVPFASLDFNWRVALLSTSPTPDLNAQNGYLDVERPGAGYTAPMTFSIAATAESDETIVTEYETVSDTSVGTMIDAPNTVDIFNRWQRAAGGDYFGTSVTVPLSNDASTLLFDNNRIEVQRNTTNYTMLLSPVSYKKFDYQCVVGSQDNDDDAIGMVVAFARVDGVNHSILAMRNRGGAGGLAPLKNFMLIYVRNNTIVRNLGSADIGTGTGAWRDHTTKIRVVRNGDSVQCYATPFDSTVFDPTPLTVDLSSSPDLAVFRDFCRFGFVAYSQAFAYFDDIDFVQPANPDYVTTYGSVAIAPGDIEAEVAVTINGTDAVPNTGSVMLRIANARNAKIVNAIGTGNF
Physico‐chemical
properties
protein length:675 AA
molecular weight: 69766,62350 Da
isoelectric point:4,76279
aromaticity:0,07407
hydropathy:-0,26178

Domains

Domains [InterPro]
IPR050149
79–232
IPR050149
AFH14774.1
1 675
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lu11
[NCBI] 		1161927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida
[NCBI] 		303 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFH14774.1 [NCBI]
Genbank nucleotide accession
JQ768459.1 [NCBI]
CDS location
range 193703 -> 195730
strand +
CDS
ATGCCCCGGTTAACTAAAATTTCGCCGTCGATGATTTCCACACAGGGATCGAATGTCGGCGACGTGCTCAAGGATGACGGGATTAAATATTCCCCGAATCCTGAGCGTGTGCATATTACTGGCGCTGTAAAAAGCGCCTCGTATGACAAAGAAACTGGCGTATTTCGTATCGTAAACAGTGACGACTCTGAAATCGTTGTAACTGGTTTGCCTACTTCGTCAAATATTGGGGTTGGCGCTACCGGCCCAACTGGCCCGCAAGGCGCAAAAGGAGATAACGGAAGAAATGGTAAAGATGGGCGCGATGGTCCTGCGGGCTGTATTGGCCCGAAAGGTGATGCAGGCCCTGCTGGTCCTCCCGGTGGTTATGGCGGTATCGGCCCCCGTGGCCCAGTAGGCGCAACAGGTCCGCAAGGCCCGCAAGGTTTACCCGGTGAAAAAGGCCCGATTGGTCCTACCGGGCCTGCTGGCCCTACGGGGCCTAGCGGTGGCGCTGGTCAAATTGGCCCTACCGGTCCACAAGGAATTATTGGTTTAACTGGTGCAACCGGTCCAACTGGCCCGCAAGGCGAAATTGGCCCGATTGGTCCTACTGGTCCAAAAGGTGAAAGCGGAACGGAAGGTGCAACCGGTTTGCAAGGCCCGCCCGGTGAACCCGGTCCTGCTGGCGTTGGTTTGCCCGGTCCGCCCGGAGCATCTGCAATTTTCACCAATGATTTTTGGACGCACGAAAACCCGTCTGTTGGTCGCTACGGTTCCATTGAAGTCGGCGACAAAACAATGGAAATTATGGGCACCTATAAATCCAGTTCGTCGGTGCAGGATATTTCTCTAACACTGCCGTTTAATGGAAAGGGTGCGCGTCGTGCAATTGCGTACATTAGTTTCAACAAATTCCCTACGGAATTGCGCACGACCGGTAACTACACGGCGACCGTTGAAAACACGATAGACGGTGATACTTCCTGTACGTTGAAGTTCAACGGCACGGTTCCTTTTGCGTCCCTTGATTTCAACTGGCGTGTGGCTCTGCTTTCCACTTCGCCTACGCCAGATTTGAATGCGCAAAATGGTTATCTTGATGTTGAGCGTCCGGGCGCCGGATACACCGCGCCTATGACGTTCTCGATTGCAGCCACTGCGGAATCTGATGAAACAATCGTGACTGAATACGAAACTGTTTCTGATACCAGTGTCGGCACCATGATCGATGCACCAAATACCGTGGATATTTTCAACCGCTGGCAGCGTGCGGCGGGTGGTGATTACTTCGGCACTTCGGTAACGGTTCCGCTGTCGAACGATGCTTCCACTTTGCTGTTCGATAATAACCGAATTGAAGTGCAGCGCAATACCACAAACTACACCATGCTGCTGTCGCCCGTTTCTTACAAGAAATTCGATTATCAATGTGTTGTAGGTTCGCAGGACAACGATGACGATGCCATCGGTATGGTTGTCGCGTTTGCCCGCGTGGATGGCGTAAACCATTCCATTCTGGCAATGCGTAACCGTGGTGGCGCGGGTGGCCTCGCTCCGCTGAAAAACTTCATGCTGATTTACGTGCGCAATAACACAATTGTGCGCAACCTCGGCTCGGCGGATATTGGTACGGGTACTGGCGCATGGCGTGACCACACGACGAAAATTCGTGTAGTGCGAAATGGCGATTCCGTGCAGTGCTACGCAACGCCGTTTGATTCGACCGTTTTCGATCCTACGCCGCTGACTGTCGATTTGAGCAGCTCGCCAGACCTCGCCGTCTTCCGCGACTTCTGCCGGTTTGGTTTTGTTGCTTACTCGCAAGCATTTGCCTACTTTGACGATATCGATTTTGTGCAGCCTGCAAATCCTGATTATGTCACTACGTATGGTTCGGTCGCAATTGCGCCGGGCGATATCGAGGCAGAAGTGGCAGTGACCATTAACGGCACCGATGCAGTTCCGAACACTGGTTCTGTAATGCTGCGAATTGCAAACGCAAGAAATGCCAAGATTGTTAACGCAATCGGCACCGGCAATTTCTGA

Tertiary structure

PDB ID
0c79a86e766cc78874462de5ccece9804cd7e36ffa73b01bd8a33459204cb957
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5435
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50