Protein

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Genbank accession
ULF49833.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,65
Protein sequence
MPLISSSIPNLINGVSQQPAALRLASQAEEVINCMPSPVEGLKKRPPMQHIKKLFAGSAGTGRPFTHIVDRDGVIRYLIFIQDNAIKVFDLDGNAQTVSTPNGTSYLNITGEPSSTFRVASIADFTFIVNREKTVAMDTTNKSYNWGTKSMVFIKSADFSTTYRVKLNGTEKSVTTGNSSGSAPDTVTIASDLATQLNTISGFTVTSTDYIIRITKDDGGDYTLESSDTKTADATSAIKGTVDSITDLPTIAEHNFTVRIQGSATTAFDDYFVKFEATAGSGFGPGVWRETVAPNIDHLLDKSTMPHTLVRNANGTFTFAQFNYTGRVAGDTTTAPNPTFVGSKIKNINLFRNRLVFLADENVILSAADSFERFFPETVQTLLDSDPIDISSGGTSVNFLNSSLAFANTLLLFSLHGQFRLDTGSTSVGTALTPKTATITAITTFDIVDAIDPIGVGRTVYFGIPKGDFSGLREYFLPDASGPIPLSEEVTSSVPRFVPGNLISMSPSVSEEVITMISKDQPRRVYIYKFFFDDDQKLQSSWSYWEVAANKTLLGGNVLDSDLYTCVEYSDGVYLEKTQLRPETVDSGTEFEILLDRKTTEAACSTSLINSGALGVQTVITLPYPMSGTGTMAVVGRFASNNTIAHGQVIKATAETLTGGASGNGTMTVPGDLSSAKFFVGEIYNMTYEFSTPYLKETPPGGGLAVLANPRLQLRTWSIVFDETSNFSMKITPGQRDELTYPFNGYKIGSGQFPIGTPSLATGRFRVPVMAQNIETKIVLFSDSPLPCRVQSAEWEGWYQERARRL
Physico‐chemical
properties
protein length:806 AA
molecular weight: 87371,28460 Da
isoelectric point:5,12065
aromaticity:0,09553
hydropathy:-0,12122

Domains

Domains [InterPro]
IPR058003
TTP
1–805
IPR058003
ULF49833.1
1 806
Architecture
TTP
TTP 1-805 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ULF49833.1
1 806
Domain Start End Length (AA) Confidence
N-terminal 1 136 136 0,9671
Central domain 137 335 200 0,1093
C-terminal 336 806 470 0,3030
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-136
Central
137-335
C-terminal
336-806

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SCSP1k
[NCBI] 		2914497 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ULF49833.1 [NCBI]
Genbank nucleotide accession
OM416771 [NCBI]
CDS location
range 12915 -> 15335
strand +
CDS
ATGCCACTAATCAGTAGCTCTATTCCTAATCTTATTAATGGAGTAAGTCAGCAACCAGCAGCGTTACGCCTGGCATCACAGGCAGAAGAAGTAATTAACTGTATGCCTAGCCCTGTTGAAGGGTTAAAGAAAAGGCCACCTATGCAACACATAAAAAAATTGTTTGCAGGATCAGCTGGAACTGGTAGGCCATTTACACACATTGTTGATAGAGATGGTGTAATAAGATATTTAATTTTTATACAGGATAACGCTATAAAAGTATTTGATTTAGATGGTAATGCACAGACAGTATCTACACCCAACGGCACTAGCTATTTGAATATCACAGGAGAACCTAGCTCTACATTTAGGGTTGCTTCTATTGCTGACTTTACATTCATAGTTAACAGAGAAAAGACAGTTGCTATGGACACTACAAACAAGTCATATAACTGGGGTACAAAGTCAATGGTATTTATAAAATCTGCTGACTTTTCTACTACATACAGAGTTAAATTAAATGGCACAGAAAAGAGCGTGACTACTGGTAACTCTTCTGGCTCTGCTCCCGATACTGTAACGATTGCTAGTGACCTGGCTACACAGCTAAATACTATATCTGGTTTTACTGTAACCAGTACCGACTACATAATTAGGATTACTAAAGATGATGGTGGCGATTACACGCTTGAAAGTAGCGACACAAAAACAGCGGATGCAACATCAGCAATAAAAGGAACAGTAGATAGTATTACTGATCTGCCTACTATTGCAGAGCATAACTTTACAGTAAGAATACAAGGGTCTGCTACTACTGCTTTTGATGATTACTTTGTTAAATTTGAAGCCACAGCTGGTAGTGGTTTTGGTCCAGGTGTATGGAGAGAAACTGTTGCGCCAAACATTGACCACTTGTTAGATAAGTCAACAATGCCACATACCTTAGTAAGAAATGCTAATGGTACTTTTACTTTTGCGCAGTTTAACTATACAGGCCGTGTAGCTGGAGATACTACAACTGCACCTAACCCTACTTTTGTAGGCAGTAAAATAAAAAACATTAACTTGTTTAGAAACAGGCTTGTATTTCTAGCAGATGAAAATGTTATCTTATCTGCTGCTGATTCGTTTGAAAGATTTTTCCCAGAAACAGTACAAACCTTATTAGATTCTGACCCTATAGATATTAGCTCTGGCGGTACATCAGTTAACTTTTTAAATAGCAGCCTGGCTTTTGCAAATACATTATTACTGTTCAGTTTGCATGGACAGTTTAGATTAGATACTGGTTCAACATCTGTAGGTACAGCACTTACACCAAAGACGGCAACCATAACTGCTATAACTACATTTGATATTGTCGATGCTATTGACCCTATAGGTGTTGGTCGAACTGTTTACTTTGGCATACCGAAAGGAGATTTTAGTGGCTTGAGAGAATACTTCTTGCCTGACGCTAGTGGACCAATACCTTTATCAGAAGAAGTAACATCTTCAGTTCCTAGATTTGTACCAGGCAATTTAATTAGTATGTCTCCTTCTGTATCAGAAGAAGTAATAACAATGATTAGTAAAGACCAGCCACGCAGGGTTTATATCTATAAATTTTTCTTTGATGATGACCAGAAGCTACAGTCATCCTGGTCGTATTGGGAGGTTGCTGCAAACAAAACATTATTAGGTGGCAATGTTTTAGATAGCGACTTATATACTTGTGTCGAATATTCAGATGGAGTGTACTTAGAAAAGACACAGCTAAGACCTGAGACTGTAGATAGCGGTACAGAGTTTGAAATATTGTTAGATAGAAAAACTACAGAAGCTGCTTGCTCTACATCCCTTATAAACTCAGGCGCATTAGGAGTACAGACTGTAATTACATTGCCGTATCCTATGTCGGGTACAGGAACTATGGCAGTAGTAGGTAGGTTTGCTTCTAACAATACTATTGCGCATGGACAAGTTATAAAAGCAACAGCTGAAACTCTTACAGGTGGAGCTAGTGGTAATGGAACTATGACTGTGCCTGGAGATTTAAGTAGTGCAAAGTTTTTTGTAGGGGAAATATATAATATGACCTATGAATTTTCTACACCATATTTAAAAGAAACACCTCCTGGAGGAGGTTTAGCTGTACTGGCTAACCCAAGACTACAGCTACGAACCTGGAGTATTGTGTTTGATGAAACATCTAACTTCTCTATGAAGATTACACCAGGGCAAAGAGATGAATTAACTTATCCATTTAACGGATACAAGATAGGTAGTGGTCAGTTTCCGATAGGTACACCATCACTAGCTACTGGTAGGTTTAGAGTTCCTGTCATGGCACAAAACATAGAAACAAAAATTGTACTCTTTAGTGATTCTCCGTTACCCTGTAGGGTACAGTCAGCAGAATGGGAAGGATGGTATCAAGAACGAGCGAGAAGGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e22a9b5309c868fbfe9182daf125b5b9272feb9c948619e0b4f7d67a2064ff18
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3051
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A cosmopolitan and abundant lineage of cyanopodoviruses lacking the DNA polymerase gene Cai,L., Chen,Y. and Zeng,Q. 2022-11-10 — GenBank